ggKbase home page

scnpilot_solids2_trim150_scaffold_2815_curated_11

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(7839..8498)

Top 3 Functional Annotations

Value Algorithm Source
General secretory pathway protein E n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W368_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 219.0
  • Bit_score: 422
  • Evalue 3.00e-115
General secretory pathway protein E {ECO:0000313|EMBL:EIL93909.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 219.0
  • Bit_score: 422
  • Evalue 4.20e-115
type II secretion system protein E (GspE) similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 219.0
  • Bit_score: 414
  • Evalue 2.50e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATCATCACCGTCGAGGACCCGGTCGAATACCAGCTCGAAGGCATCAACCAGATCCAGGTGAAGCCGCAGATCGGGCTGGATTTCTCCGGCGCCCTGCGCTCGATCATGCGCCAGGACCCGGACGTGATCATGATCGGCGAAATGCGCGACCTGGAAACCTGCCGCATCGCGATCCAGTCCGCGCTCACCGGCCACCTGGTGCTGTCCACCCTGCACACCAACTCGGCGGCCGGCGGCGTCACCCGCCTGCTCGACATGGGCGTGGAGGATTACCTGCTCGGCTCCACCATCAACGGCATCCTGGCGCAGCGCCTGGTGCGCCGGCTCGATCCGGAAACCGCGATTGCCTACGAGGCCTTGCCCGAGGTGATCGCGCAGTTCGAACTGGAGAAATACACCGACGAACGCCCGATCCGCCTGTGGAAACCCGGCACCAGCGCGGCCAACCCCAGCGGCTACCGCGGCCGCCGCGCGATCATGGAGTTCCTCACCATGAGCGATCCGCTGCGTCGCCTGGTGATGCAGCGCGCCAGCGAGGGCGAGATCGAGAAACAGGCCCGCGCCGAAGGCATGCGCACCATGTACGAGGACGGCATCGCCAAGGCCGTCGCCGGCATCACCACGCTGGAGGAGGTGATGCGTGTCACGCAGGAGGGCTGA
PROTEIN sequence
Length: 220
IITVEDPVEYQLEGINQIQVKPQIGLDFSGALRSIMRQDPDVIMIGEMRDLETCRIAIQSALTGHLVLSTLHTNSAAGGVTRLLDMGVEDYLLGSTINGILAQRLVRRLDPETAIAYEALPEVIAQFELEKYTDERPIRLWKPGTSAANPSGYRGRRAIMEFLTMSDPLRRLVMQRASEGEIEKQARAEGMRTMYEDGIAKAVAGITTLEEVMRVTQEG*