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scnpilot_solids2_trim150_scaffold_22340_curated_2

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: 750..1229

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 329
  • Evalue 6.00e-88
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 329
  • Evalue 2.70e-87
DNA-directed RNA polymerase subunit beta' n=1 Tax=Rhodanobacter denitrificans RepID=I4WGB7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 329
  • Evalue 1.90e-87

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGAAAGACCTGCTCAATCTGTTCAACCAGCAGCGCGCGACGCCGGATTTCGACGCGATCAAGATCGCGCTCGCCTCGCCGGAACTGATCCGCTCGTGGTCGTACGGCGAAGTGAAGAAGCCGGAAACGATCAACTACCGCACCTTCAAGCCGGAGCGTGACGGCCTGTTCTGCGCGGCCATCTTCGGTCCGGTGAAGGACTACGAGTGCCTCTGCGGCAAGTACAAGCGCATGAAGCACCGCGGCGTGGTGTGCGAGAAGTGCGGCACGGAAGTGACGCTGGCCAAGGTGCGTCGCGAGCGCATGGGCCACATCGAGCTGGCCAGCCCGACCGCGCACATCTGGTTCCTGAAGTCGCTGCCCTCGCGCATCGGCCTGATGCTAGACATGACCTTGCGCGACATCGAGCGCATCCTGTACTTCGAGGCCTTCGTGGTGATCGACCCGGGCATGACCGCGCTGGAGCGCGGCCAGCTGCTC
PROTEIN sequence
Length: 160
MKDLLNLFNQQRATPDFDAIKIALASPELIRSWSYGEVKKPETINYRTFKPERDGLFCAAIFGPVKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIELASPTAHIWFLKSLPSRIGLMLDMTLRDIERILYFEAFVVIDPGMTALERGQLL