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scnpilot_solids2_trim150_scaffold_2763_curated_4

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(2666..3445)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Nevskia ramosa RepID=UPI0003B5FCC2 similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 255.0
  • Bit_score: 330
  • Evalue 1.40e-87
Periplasmic binding protein {ECO:0000313|EMBL:EIT70015.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 250.0
  • Bit_score: 321
  • Evalue 1.50e-84
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 258.0
  • Bit_score: 270
  • Evalue 5.40e-70

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Taxonomy

Hydrocarboniphaga effusa → Hydrocarboniphaga → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGCGCATCTTCTCCCACACCTGCTCCAACACCGAGATCGTCTGTGCGCTCGGCTGCGCCGACCAGCTGGTTGGCGTGGATGCGGATTCCGATTACCCGCCCGACGTGGTGGCGCGGTTGCCCAGCACCGGGCGCGATCTGGATCTGGACGTGGAGGCGGTGCAGGCGCTGGAACCGGACCTGGTGCTGAGTTCGCTGACCGTGCCGGGGCACGAGCAGGTGGTCGCCGAGCTGCATGCGGCGGGGCTGGCCACCCTGGTGTGCGATCCGCAATCCCTGGATGACGTGTACGACGACATCCGGCGCATCGCCGCCGCGTTGGGCGTGGGCGAACGCGGCGCCTCGCTGGTGGCGTCGATGCGTGCGGCGATGCCGGCGGCGGAGGTGCCCGGCGCGCGTCCGCGCGTGCTGGTGGAGTGGTGGCCCAAGCCGGTGATCGCGGTGGCCCGGCAGTCGTGGGTGAACGACATCATCCACCTTGCCGGCGGCATCAACCCGTGGGGCGAGGTGGATGCCCGCAGCGTGCCGCTGCACTATGCCGACGCGGCGGCCGCGCGCCCGGACATCGTGGTGATGAGCTGGTGCGGCGTGAAGGTGGAGAACTACCGCGCCGACAAGGTGCGCGGGCGCCCGGACTGGGCCGAGGTGCCGGCAGTGCAGCACGACCGCATCCATGCGATCAGCGAGGCCTACCTTGGCCGACCCGGTCCACGGCTGGTCGAGGGCTATCGGCAGTTGCGCGCCGCCATCGTGGCTGCCGGCTCCCCCGCGATGCCATGA
PROTEIN sequence
Length: 260
MRIFSHTCSNTEIVCALGCADQLVGVDADSDYPPDVVARLPSTGRDLDLDVEAVQALEPDLVLSSLTVPGHEQVVAELHAAGLATLVCDPQSLDDVYDDIRRIAAALGVGERGASLVASMRAAMPAAEVPGARPRVLVEWWPKPVIAVARQSWVNDIIHLAGGINPWGEVDARSVPLHYADAAAARPDIVVMSWCGVKVENYRADKVRGRPDWAEVPAVQHDRIHAISEAYLGRPGPRLVEGYRQLRAAIVAAGSPAMP*