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scnpilot_solids2_trim150_scaffold_15063_curated_1

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: 1..402

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346FC34 similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 130.0
  • Bit_score: 186
  • Evalue 1.70e-44
Histone family protein DNA-binding protein {ECO:0000313|EMBL:EIL90951.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 132.0
  • Bit_score: 184
  • Evalue 1.20e-43
histone family protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 136.0
  • Bit_score: 171
  • Evalue 2.30e-40

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
GATCAACTAATGGCTACCAAAACCACTGCCAAGAAAGCTCCCGCCAAGGCTGCCAAGCCTGCCGCCGCCAAGTCCGCCGCGCCGGTCAAGCCGCTGGGCGAGAGCCTGTCGAAGTCCGGGCTGATTGCCCACATCGCCGCGCAGGCCAACGTCGAGGCGAAGGCGGTCAAGGCCGTGCTCGCCGGCCTGGAGTCGGCCGTGCTCGCCTCGGTGCACAAGAAGGGCGTGGGCCAGTTCACCCTGCCCGGCCTGTTCAAGATCAACGCCGTGAAGGTTGCCGCCAAGCCGAAGCGCAAGGGCAAGAACCCGTTCACCGGCGAAGAGCAGGTGTTTGCCGCCAAGCCCGCCACGGTGAAGGTGAAGGTGCGCCCGCTGAAGAAGCTGAAGGACGCCGCGCTCTGA
PROTEIN sequence
Length: 134
DQLMATKTTAKKAPAKAAKPAAAKSAAPVKPLGESLSKSGLIAHIAAQANVEAKAVKAVLAGLESAVLASVHKKGVGQFTLPGLFKINAVKVAAKPKRKGKNPFTGEEQVFAAKPATVKVKVRPLKKLKDAAL*