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scnpilot_solids2_trim150_scaffold_7008_curated_4

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(2002..3105)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI99_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 367.0
  • Bit_score: 727
  • Evalue 7.20e-207
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 367.0
  • Bit_score: 727
  • Evalue 1.00e-206
SSU ribosomal protein S1P similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 367.0
  • Bit_score: 725
  • Evalue 8.60e-207

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
ACCGAGGGCGCGGTGGTCAAGGGCACGGTCAAGAACCTCACCGACTACGGCGCGTTCGTGGACCTGGGCGGCATCGACGGCCTGCTGCACATCACCGACATGGCATGGAAGCGCGTGCGTCACCCGTCCGAAGTGGTCAACGTCGGCGACGAGCTGGACGTGCGCGTGCTGAAGTACGACAAGGAGCGCAACCGCGTCTCGCTGGGCCTGAAGCAGCTGGGCGACGACCCGTGGGTCGCCATCGCCCGCCGCTACCCGGTCGGCAGCCGCCTGTTCGGCAAGGTCTCCAACGTCACCGACTACGGCTGCTTCGTCGAGATCGAGCCGGGCGTGGAAGGCCTGGTCCACGTGTCCGAGATGGACTGGACCAACAAGAACGTCAACCCGGCCAAGGTGGTGCAGGTCGGCGACGAGACCGAGGTGATGGTGCTGGACGTGGATGAAGAGCGTCGCCGCATCTCGCTGGGCATCAAGCAGACCCGCTCGAACCCGTGGGAAGCCTTCGCCGCCATGCACAAGAAGGGCGACAAGGTCTCCGGCCAGATCAAGTCGATCACCGATTTCGGCGTGTTCATCGGCCTGGAAGGCGGCATCGACGGCCTGGTGCACCTGTCCGACATCTCCTGGCAGATGTCCGGCGAAGACCTCGTGCGCAACTTCAAGAAGGGCGACGAGATCGAAGCGGTGGTGCTGGCGGTGGACCCGGAGCGCGAGCGCATCAGCCTCGGCATCAAGCAGATGGAGCAGGATCCGTTCGGCCAGTTCATGGCGGCGAATCCGCGCGGCAGCATCGTCACCGGCACCGTGAAGGAAGTTGACGCCAAGGGTGCGGTGATCGACCTGGGCGAGGGCGTGGAGGGTTACCTGCGCGCCAACGACATCGCCAAGGAGCGCATCGACGACGCCACCCAGCATCTGAAGGTGGGCGACAAGGTCGAGGCCAAGTTCACCGGCATGGATCGCAAGGGTCGCCAGCTGGCACTCTCGATCCGCGCCAAGGACGAGGAAGACGCGCCCGACACGTCGGCGGATTACTCGTCCGCCGCCAGCGGCACGACCAAGCTCGGCGCACTGCTCAAGGAGCAGTTCAACAAGGCCGACTGA
PROTEIN sequence
Length: 368
TEGAVVKGTVKNLTDYGAFVDLGGIDGLLHITDMAWKRVRHPSEVVNVGDELDVRVLKYDKERNRVSLGLKQLGDDPWVAIARRYPVGSRLFGKVSNVTDYGCFVEIEPGVEGLVHVSEMDWTNKNVNPAKVVQVGDETEVMVLDVDEERRRISLGIKQTRSNPWEAFAAMHKKGDKVSGQIKSITDFGVFIGLEGGIDGLVHLSDISWQMSGEDLVRNFKKGDEIEAVVLAVDPERERISLGIKQMEQDPFGQFMAANPRGSIVTGTVKEVDAKGAVIDLGEGVEGYLRANDIAKERIDDATQHLKVGDKVEAKFTGMDRKGRQLALSIRAKDEEDAPDTSADYSSAASGTTKLGALLKEQFNKAD*