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scnpilot_solids2_trim150_scaffold_1473_curated_14

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: 11711..12661

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide biosynthsis protein; K07271 lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 264.0
  • Bit_score: 214
  • Evalue 5.60e-53
LICD family protein n=2 Tax=Bacteroidales RepID=D0TB12_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 264.0
  • Bit_score: 214
  • Evalue 1.80e-52
LicD family protein {ECO:0000313|EMBL:KDS57660.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 264.0
  • Bit_score: 214
  • Evalue 2.50e-52

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Taxonomy

Parabacteroides distasonis → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 951
ATGATGGACGTTAACGAATCGGATCGCGTTTTGGTGGCTGAGTGTCAGTTTCCTGAGGTACGCGAGGTCCAACTGGCGCTGTTACGTATCTTAAAGAATGTGGACGCAATTTGTCGCCGGCACGCAATTCTGTATTGGCTGGATGGTGGAACCCTGTTGGGGGCGGTGCGACACAAGGGATTCATTCCTTGGGATGATGATGTAGACATCGTGATGCCGCGGGAGGATTACGAAAGGTTCGTCGAAGTGGCTCAGTCGGAATTGCAGCCCGACTTGTTTCTGCAAACACGCCTGACGGATCCTGGCTATGCAATCTATCAAGTACCTTGCAAGATAAGGGAACTGGCGAGCGTTGAGCTCGAAGCCTTGAGCGACGAAGAGGGCGCGGAATGGGGGATCTACCTAGATATTATACCCATCGATAAGTACAGGAAGTTCGGATTTGGCCGATTTGTGGATTATTCGGCTAAATATCTTTACAGACGTCTGTGTGGCATTAATGCATCGAAACGGGCGGACGGTAAAGGCATCCGGCAGCGGCTTAACAATTTTTTTGCGCGGGTCAAGCATCTCATTTTTTCCGATATTCTGGTAGAGGCCTACCGGAAAAAACTGCAGGGGAAGATAAATCGTAGCAAAAGACTTGAATCCGGATATCGACTTGGTTACGCGTTTGACTCTTTGTGGATGCGCTTCTTTGATCCAAAAGATATTTTCCCCCTGCGAGAGATGCTTTTTGAAGATGGATCGTTTCCGGCACCAGCTAACTGTGCCGCCGTCCTACGTGTGTTCTACGGAAGTAATTATATGACCCTGCCCGAAGAGTCGCAAAGGTTGCCGCGCAAAGTGAAGTTAGCGCGGGACATAGCTCTGCTGCGTGAGGCAGGTGTCGACCCCCGGACAGGTCAGTCTGGAGCTAATCGTCCTAGACGCCGAAAGCGCTCGGCTTGA
PROTEIN sequence
Length: 317
MMDVNESDRVLVAECQFPEVREVQLALLRILKNVDAICRRHAILYWLDGGTLLGAVRHKGFIPWDDDVDIVMPREDYERFVEVAQSELQPDLFLQTRLTDPGYAIYQVPCKIRELASVELEALSDEEGAEWGIYLDIIPIDKYRKFGFGRFVDYSAKYLYRRLCGINASKRADGKGIRQRLNNFFARVKHLIFSDILVEAYRKKLQGKINRSKRLESGYRLGYAFDSLWMRFFDPKDIFPLREMLFEDGSFPAPANCAAVLRVFYGSNYMTLPEESQRLPRKVKLARDIALLREAGVDPRTGQSGANRPRRRKRSA*