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scnpilot_solids2_trim150_scaffold_1473_curated_19

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(19028..19471)

Top 3 Functional Annotations

Value Algorithm Source
Fimbrial protein P9-2 Pilin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCH5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 146.0
  • Bit_score: 220
  • Evalue 1.20e-54
prepilin-type N-terminal cleavage/methylation domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 146.0
  • Bit_score: 220
  • Evalue 3.60e-55
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGG88084.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 146.0
  • Bit_score: 220
  • Evalue 1.60e-54

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGTCACGCCAGCGCTTGTCCGCCGGTTTCACCTTGATCGAACTGATGATCGTCGTGGCGATCATCGCCATCCTTGCCGCCATAGCCATTCCGGCCTATCAGGATTATCTGATTAGGGCGCAAGTGTCGGAAGGCTTTGTCTTGGCGGGTGGCGCGAAAGCCGCCGACTGGGATTTCGTCTCCAACACGGGAAGGTTCCCACCAAACAACGAATCCGCAGGTCTCGCGAAGAACGTATCTATCAAAGGCCAGTACGTCTCCAGCGTCGATCTCGCCGATGGAGTGATCAAGGTTCTGTTCAATGGACCCAAAGCCAATGAGGCCATCCGACCCTCGGCCAAATACGTAATGCTTTCGCCGATCACCCACGCTGGGAGCATCGAATGGACATGCACCGCCAGCACAGTCGACCACAAGTACTTGCCGACCTCCTGCCGCGGATGA
PROTEIN sequence
Length: 148
MSRQRLSAGFTLIELMIVVAIIAILAAIAIPAYQDYLIRAQVSEGFVLAGGAKAADWDFVSNTGRFPPNNESAGLAKNVSIKGQYVSSVDLADGVIKVLFNGPKANEAIRPSAKYVMLSPITHAGSIEWTCTASTVDHKYLPTSCRG*