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scnpilot_solids2_trim150_scaffold_1505_curated_3

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(1873..3336)

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHZ4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 462.0
  • Bit_score: 788
  • Evalue 4.60e-225
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIL99085.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 462.0
  • Bit_score: 788
  • Evalue 6.40e-225
arabinose efflux permease family protein similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 494.0
  • Bit_score: 787
  • Evalue 3.20e-225

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1464
ATGCCCGACATGGCCAGCCCAGCCGCCGCGGACGCCCCTTCAGCAACGGTTTCGGCCGCCTTGCCCGAGCCGTCCACGCGCGAGCGCTTCCGCGGCCTGCTGTGGCTGGTCGCGGCGGCCTTCTTCATGCAGGCGCTGGATTCCACCGTGGTCAACACCGCGGTGCCGATGATGGCCGTGGCGCTGGAGGTAACCCCGCTGGGCATGCGCACGGCGCTGACCAGCTACGTGCTGACCCTGGCGATCCTGATCCCGGCCAGTCCGTGGCTGTGCGACCGGCTGGGCACGCGGCGGGTGTTCGGCGCCGCGATCGTGGTGTTCGGGCTGGGTTCGCTGCTGTGCGGGCTGGCGCAGACGCTGCCGCAACTGGTCGCCGCGCGCGTGCTGCAGGGCATCGGTGGCGCCTCGCTGATGCCGGTCGGGCGCTACGTGCTGGTGCGCAGCATCGACAGGCGCGAGTTCGTGCGCGCGATGAGCACGGTGGCCACCTTCGGCCTGCTGGGTTCCGTACTCGGCCCCCTGCTCGGCGGCGCGCTGGTGGAGTTCACCTCGTGGCGGCTGATCTTCCTGATCAACGTGCCGGTGGCGATCGCCGGGGTGTGGATGAACCGGCGCGACATGCCGGACTACCGGCTGGAGCGCGCACACCGTTTCGACCTGTTCGGCTTCGGGCTTTTCGCCGCCGCCTCGGCCCTGCTGCTGATCGCCTCGGAGCTGGCCGGCGCCACGCCGGTGCCGTGGATGCGCATCGGCCAATGCAGTCTGGCGGCGGTGCTGCTGGGCCTGGCCTATGTGTGGCACAGCCGACGCACCGCCTTTCCGGTCGCCGACCTGACCCTGCTCAAGGTGCGCAGCGTGTGGGTGGCGCTGGCCGGCGGCCTGTTCACCCGGCTCGGCATCTCCGGCATGTTCCTGTTGCTGGTGCTGTTCCTGCAGGTCGGTTGCGGCTGGTCGCCGCTGATGGCCGGCCTGATGATGGTGCCGCAGGCATTGGGTTCGATCTGCGCCAAATGGGCGATCAATCGCGTGCTGGTGCACCTGGGTTACCGCCGCCTGCTGCTGGGCAACACCTTGATCGTGGCCGTGCTGCTGGCGGCGTTTGCCCTGCTCGGACCGGCCACGCCGGTGTGGGCCATCGCGACGTTGACGTTCTGCTACGGCGGCTTCGCCGGGCTGCAGTACACCGCGATGAACACGCTGATCTACCACGACCTGGACATCGCGCACGCCTCGATGGCTTCGTCGATGGCCTCGACCGTGCAATACCTCGCGATGAGCTTCGGCATCGCGCTGTCCACGCTGCTGATGCAGGCGCTGCTGCAGGGGCATGAGCGCGCGGATTATGTCGAGGCGTTCCGCTGGACGGTGCTGCTGCTGGCGCTGGTCACGGCGGCGGCCAGCCGCGTGTTCGGCCGGCTGCGGCACGATCGCCCGCTGTCGCGAGCCGGCGCGGCGGCAGGTTGA
PROTEIN sequence
Length: 488
MPDMASPAAADAPSATVSAALPEPSTRERFRGLLWLVAAAFFMQALDSTVVNTAVPMMAVALEVTPLGMRTALTSYVLTLAILIPASPWLCDRLGTRRVFGAAIVVFGLGSLLCGLAQTLPQLVAARVLQGIGGASLMPVGRYVLVRSIDRREFVRAMSTVATFGLLGSVLGPLLGGALVEFTSWRLIFLINVPVAIAGVWMNRRDMPDYRLERAHRFDLFGFGLFAAASALLLIASELAGATPVPWMRIGQCSLAAVLLGLAYVWHSRRTAFPVADLTLLKVRSVWVALAGGLFTRLGISGMFLLLVLFLQVGCGWSPLMAGLMMVPQALGSICAKWAINRVLVHLGYRRLLLGNTLIVAVLLAAFALLGPATPVWAIATLTFCYGGFAGLQYTAMNTLIYHDLDIAHASMASSMASTVQYLAMSFGIALSTLLMQALLQGHERADYVEAFRWTVLLLALVTAAASRVFGRLRHDRPLSRAGAAAG*