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scnpilot_solids2_trim150_scaffold_3327_curated_13

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(18963..19250)

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 95.0
  • Bit_score: 181
  • Evalue 4.10e-43
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 95.0
  • Bit_score: 167
  • Evalue 2.40e-39
Serine hydroxymethyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJA2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 95.0
  • Bit_score: 181
  • Evalue 3.00e-43

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGATCGGCAAGCCGATCACCGGCAAGGACGCCGAGGCCGCGCTGGGCAAGGCGCACATCACGGTCAACAAGAACGCCGTGCCGAACGACCCGCAAAAGCCCTTCGTCACCTCCGGCCTGCGCGTAGGCACCCCCGCCGCCACCACCCGCGGTTACAAGGAAGCCGACTGCGTGGCCCTGGCCGGCTGGATCTGCGACGTGCTCGACGCCCCGAACGACGCCGCCGTGATCGCCCGCGTGCGCGACGCGGTGACGGCGCAGTGCCGCAAATTCCCGGTCTACGGCTGA
PROTEIN sequence
Length: 96
MIGKPITGKDAEAALGKAHITVNKNAVPNDPQKPFVTSGLRVGTPAATTRGYKEADCVALAGWICDVLDAPNDAAVIARVRDAVTAQCRKFPVYG*