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scnpilot_solids2_trim150_scaffold_31_curated_36

Organism: solids_Sphingobacteriales_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 40277..41290

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00038117A5 similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 311.0
  • Bit_score: 394
  • Evalue 1.30e-106
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN19009.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 274.0
  • Bit_score: 265
  • Evalue 7.70e-68
TonB-linked outer membrane protein, SusC/RagA family similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 298.0
  • Bit_score: 258
  • Evalue 2.70e-66

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1014
ATGAAATCAAACGTTATGCGCCTGTTGTTAATGCTTTTTATAGCATTAACGGGGGGTTATGTCTTTGCCCAGCAGGGTAAAAAGGTTTCCGGAACCGTATCCGATGAAACTGGCACTCCCTTACAGGGTGTATCAGTTGCAGTAAAGGGGGCTGGCGCCATTGCAGCTACTGACGCGGCCGGCCGGTTCAGCGTATCATTAACAAACACTCAGAATGTACTCGTGTTCTCTTCAATCGGGTATGAAACAATCGAAGTAAACATTGGAACTCAAACCACTTTATCTGTAATACTCAAACCTGTTATCGTGGAAAGCGAAGCGGTTGTGATAACGGCATTAGGTGTGGCAAAACAAAAAAGGCAATTAGGATTTTCCGTAACAGAGGTTAAAGGCGCAGAGTTGTCTAAAACCAATGAAATAAATCCTATTAACGCCCTGCAGGGCAGGGTTGCCGGGGTGCAGATTGATATGGGAGGCGCCGGTGGCCTGATGTCCAGCTCCAAAATTGTAATCCGCGGTAACTCTACTCTGGGAACCAATAACCAACCCATTTTTGTTATTGATGGGGTAATTATGGACAACGATATTTTCAGTGGTAACGGACGTGACTTTGGTAACGATCTGAAGAATCTGAATATGGAAGATTTTGAAAGTGTGTCCGTATTAAAAGGATCTGCGGCGGCTGCCCTGTATGGTACAAGGGCTGTTAACGGGGTGATTTTAATTACTACTAAAAAAGGGAAACAGCGGCAGGGAATCGGCGTAACCGTTAACCAGTCGGTAAATATAACTGATCCTTACGCGGGGCCCGATTTTCAGAATGAATTTGGGGGTGGAACGGTTGGTGATTTTTTTACCGATAACAGGGATCCGAATTATAAAGCCAACGAAAGATGGACTACCAAAGTATTTCCTACCGACCCAGTTACCGGCTTACCCTATATTGACAGAGGCATAGGACGTGAACTGGAAAACTGGGGCCCGCGTATGATGGGGCAGGATGTAATTAACTAA
PROTEIN sequence
Length: 338
MKSNVMRLLLMLFIALTGGYVFAQQGKKVSGTVSDETGTPLQGVSVAVKGAGAIAATDAAGRFSVSLTNTQNVLVFSSIGYETIEVNIGTQTTLSVILKPVIVESEAVVITALGVAKQKRQLGFSVTEVKGAELSKTNEINPINALQGRVAGVQIDMGGAGGLMSSSKIVIRGNSTLGTNNQPIFVIDGVIMDNDIFSGNGRDFGNDLKNLNMEDFESVSVLKGSAAAALYGTRAVNGVILITTKKGKQRQGIGVTVNQSVNITDPYAGPDFQNEFGGGTVGDFFTDNRDPNYKANERWTTKVFPTDPVTGLPYIDRGIGRELENWGPRMMGQDVIN*