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scnpilot_solids2_trim150_scaffold_68_curated_11

Organism: solids_Sphingobacteriales_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(7257..8741)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 54 subunit, RpoN/SigL n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB80_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 493.0
  • Bit_score: 767
  • Evalue 1.10e-218
RNA polymerase sigma54 factor {ECO:0000313|EMBL:KIC94813.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 495.0
  • Bit_score: 782
  • Evalue 3.60e-223
RNA polymerase, sigma 54 subunit, RpoN/SigL; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 493.0
  • Bit_score: 767
  • Evalue 3.50e-219

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1485
ATGGCTCTGAGTCAGAGTTTACAACAAAAGCTGTTACAAAAACTATCACCCCAGCAAATTCAACTCATGAAATTGCTGCAGGTTCCTACTGCCAACCTTGAAGAAAGAATTAAAGAAGAGATGGAAGAAAATCCTGCGCTTGAGGCAAATGAGGAAGACAACGATGCCGGCGAGGGAGAACTGATTGATGAATTTGAAAGTGATAAAGAGGACGATTTTGAGGCAGAAGGCAGTGAGGATGAATATGATAATATTGATATAAGTGAATATGTGGGCGAAGATGATGATGTAGCTGATTACAGGTTGAAAGACGAGAACTACCCGGAAATTGACGAAAAACAAACACTGCCCTTTAAAATTGAAAGTACTTTTCATGAATCTTTGCTGGAACAGCTCAGTATGCTGAATTTGGATGAAAAGCAAAGAAAAATTGCGGAGCATATAGTGGGAAGTATAGATGATGACGGATATTTAAGAAGAGATTTTGGAGCCATTACAGATGATTTGGCTTTCCGGCAGAATATTGCTGCTACTGAAGAAGAAATAGCTTTGCTGGTAAAAGAGATACAGCGGTTTGATCCGCCCGGAATAGGTGCACGGGATTTAAGAGAATGCCTTCTGTTGCAGTTGGAACGGAAAAGACAAGACGGCCGGGAAGTGGATATTGCGATCAGTATACTTTCGGATTACTTTGATGAGTTTACCAAAAAACATTACGAAAAGATACAAAGAGGGTTAAACCTGACAGACGAAGATCTTAAGCTTGCTATTAATCAAATCATCCGGCTTAATCCTAAACCAGGGGGAAATGTAGGCGACACCAATAAAGGAGAAAGCTATATTATTCCCGACTTCTTTATTCATAATAATACCAATAAACTGGAACTCACACTTAATTCGAAGAATGCGCCGGATCTGCGTATCAGCGAGGGTTACAGAGATATGCTTAAAGAATATGACCGGGGAAGTAAAAAGGATAAACGGCAGAAAGAAGCGGTCATTTTTATTAAACAGAAAATTGATGCTGCCAAGTGGTTTATTGATGCTATTAAGCAACGACAAAACACCTTGTTTACTACCATGCATGCTATAATGGATTACCAGTATGAATTTTTTCTTACAGGTGATGAAACCACGTTAAAGCCGATGATTTTAAAAGATATTGCCGAACGTACGGGATTGGATATTTCCACGGTAAGCCGGGTGGCGAACAGCAAATTTGTACAAACAGAATTTGGTACATACCGGCTTAAATTCTTTTTTAGCGAATCTTTGAGTACAGACAGTGGTGAAGAAGTTTCTACACGGGAGGTAAAGAAAATATTAAGTGATATGGTAGAAGGAGAAAGCAAGAAAAAACCGCTGAGTGATGAACGGCTTACAGAATTGCTGCAACAGAAAGGATATAATATTGCCCGGAGAACAGTAGCCAAATACCGGGAACAGATGAATATTCCGGTAGCACGCTTAAGAAAACAATTATGA
PROTEIN sequence
Length: 495
MALSQSLQQKLLQKLSPQQIQLMKLLQVPTANLEERIKEEMEENPALEANEEDNDAGEGELIDEFESDKEDDFEAEGSEDEYDNIDISEYVGEDDDVADYRLKDENYPEIDEKQTLPFKIESTFHESLLEQLSMLNLDEKQRKIAEHIVGSIDDDGYLRRDFGAITDDLAFRQNIAATEEEIALLVKEIQRFDPPGIGARDLRECLLLQLERKRQDGREVDIAISILSDYFDEFTKKHYEKIQRGLNLTDEDLKLAINQIIRLNPKPGGNVGDTNKGESYIIPDFFIHNNTNKLELTLNSKNAPDLRISEGYRDMLKEYDRGSKKDKRQKEAVIFIKQKIDAAKWFIDAIKQRQNTLFTTMHAIMDYQYEFFLTGDETTLKPMILKDIAERTGLDISTVSRVANSKFVQTEFGTYRLKFFFSESLSTDSGEEVSTREVKKILSDMVEGESKKKPLSDERLTELLQQKGYNIARRTVAKYREQMNIPVARLRKQL*