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scnpilot_solids2_trim150_scaffold_965_curated_12

Organism: solids_Sphingobacteriales_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(14680..15021)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GRM6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 112.0
  • Bit_score: 130
  • Evalue 1.20e-27
XRE family transcriptional regulator {ECO:0000313|EMBL:CCH56554.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 112.0
  • Bit_score: 130
  • Evalue 1.70e-27
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 113.0
  • Bit_score: 108
  • Evalue 2.00e-21

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Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 342
ATGCATATAACCCTAGGCATTAAACAGGACGCCCTGGCTATACAGCTCGGACTTAGCCAGCAGGCGATTTCTCAACTCGAACAAAAAGAAACGCTGGATGCCCCCACAATGAACAAAGTGGCCAATGCCCTCGGTGTCAGCACTGATGCCATCCGCAACTTTAATGAAGAAGCCACTTTTAATATCATCTCGAATAATTACCACGATCATTATTCTTCAGTCAATTATCAGTTTAACCCGATTGAAAAAATTGCAGCGCTTTACCAGGAAAAAATTGCGCTCTACGAACGTATGCTTAAAGAAAAGGATGAACTCATTGACAGGCTGACGCAGAAAAAATAA
PROTEIN sequence
Length: 114
MHITLGIKQDALAIQLGLSQQAISQLEQKETLDAPTMNKVANALGVSTDAIRNFNEEATFNIISNNYHDHYSSVNYQFNPIEKIAALYQEKIALYERMLKEKDELIDRLTQKK*