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scnpilot_solids2_trim150_scaffold_56_curated

Search features with annotation key words

Displaying items 91-120 of 315 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_56_curated_91
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115650..116549)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EA1AD
LysR family transcriptional regulator {ECO:0000313|EMBL:KGI77669.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
aldo/keto reductase
scnpilot_solids2_trim150_scaffold_56_curated_92
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116653..117798
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F138B6
Aldo/keto reductase {ECO:0000313|EMBL:AHX13794.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
aldo/keto reductase
scnpilot_solids2_trim150_scaffold_56_curated_93
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117843..118835
DNA (993bp) protein (331aa)
Transcriptional regulator LysR family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0F0N0_CUPNN
Aldo/keto reductase {ECO:0000313|EMBL:KGI77668.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
LysR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_56_curated_94
unknown

Not on your lists

118922..119107
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_56_curated_95
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119142..120419
DNA (1278bp) protein (426aa)
Major facilitator family transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN19_9GAMM
arabinose efflux permease family protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_56_curated_96
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120451..121128)
DNA (678bp) protein (226aa)
Thiopurine S-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00812, ECO:0000256|SAAS:SAAS00017626}; EC=2.1.1.67 {ECO:0000256|HAMAP-Rule:MF_00812, ECO:0000256|SAAS:SAAS00017626};; Thiopurine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00812}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
thiopurine S-methyltransferase (EC:2.1.1.67); K00569 thiopurine S-methyltransferase [EC:2.1.1.67]
Thiopurine S-methyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7V3_9GAMM
scnpilot_solids2_trim150_scaffold_56_curated_97
unknown

Not on your lists

comp(121131..121616)
DNA (486bp) protein (162aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_56_curated_98
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121724..122092)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AAZ1_RHIFH
Lactoylglutathione lyase-related lyase {ECO:0000313|EMBL:AIY39401.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_56_curated_99
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122232..123902
DNA (1671bp) protein (557aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W010_9GAMM
scnpilot_solids2_trim150_scaffold_56_curated_100
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124104..125468
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RPQ1_9PROT
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_solids2_trim150_scaffold_56_curated_101
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125511..126032)
DNA (522bp) protein (174aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VMI3_9GAMM
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EIL88424.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glyoxalase/bleomycin resistance protein/dioxygenase; K06991
scnpilot_solids2_trim150_scaffold_56_curated_102
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126059..126331
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW30_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_56_curated_103
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126367..127437)
DNA (1071bp) protein (357aa)
zinc-binding oxidoreductase; K13979 uncharacterized zinc-type alcohol dehydrogenase-like protein [EC:1.-.-.-]
zinc-binding dehydrogenase n=1 Tax=Pseudomonas sp. 313 RepID=UPI0002ED2804
Hydroxyacid dehydrogenase {ECO:0000313|EMBL:KIZ50933.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryzihabitans.;"
scnpilot_solids2_trim150_scaffold_56_curated_104
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127616..128134)
DNA (519bp) protein (173aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Methionine sulfoxide reductase A n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HNF0_9RHIZ
scnpilot_solids2_trim150_scaffold_56_curated_105
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128131..128742)
DNA (612bp) protein (204aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
methionine-R-sulfoxide reductase (EC:1.8.4.11); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
methionine sulfoxide reductase B n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003797377
scnpilot_solids2_trim150_scaffold_56_curated_106
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128755..129624
DNA (870bp) protein (290aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Beta-lactamase; K01467 beta-lactamase [EC:3.5.2.6]
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWB8_9GAMM
scnpilot_solids2_trim150_scaffold_56_curated_107
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129635..130327
DNA (693bp) protein (231aa)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter denitrificans RepID=I4WS52_9GAMM
GCN5 family acetyltransferase {ECO:0000313|EMBL:KGM53317.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
putative acyltransferase
scnpilot_solids2_trim150_scaffold_56_curated_108
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130331..132613)
DNA (2283bp) protein (761aa)
Penicillin acylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WJF6_9GAMM
Penicillin acylase {ECO:0000313|EMBL:EIL99597.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
penicillin acylase
scnpilot_solids2_trim150_scaffold_56_curated_109
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132760..133212)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK81_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87622.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_56_curated_110
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133335..134477
DNA (1143bp) protein (381aa)
Chromosome partitioning ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8H6_9GAMM
Chromosome partitioning ATPase {ECO:0000313|EMBL:EIL95767.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ATPase involved in chromosome partitioning
scnpilot_solids2_trim150_scaffold_56_curated_111
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134470..135018
DNA (549bp) protein (183aa)
NADPH-dependent FMN reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8H5_9GAMM
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EIL95766.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative flavoprotein
scnpilot_solids2_trim150_scaffold_56_curated_112
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135031..136158)
DNA (1128bp) protein (376aa)
MFS transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DF12E3
MFS transporter {ECO:0000313|EMBL:AHY60487.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Major facilitator family transporter
scnpilot_solids2_trim150_scaffold_56_curated_113
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136360..137289
DNA (930bp) protein (310aa)
LysR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FDD784
LysR family transcriptional regulator {ECO:0000313|EMBL:AHY60488.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
putative LysR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_56_curated_114
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137249..137956
DNA (708bp) protein (236aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13]
Deoxycytidine triphosphate deaminase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZCS0_9GAMM
scnpilot_solids2_trim150_scaffold_56_curated_115
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138076..138483
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L4L9_FRAAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC86574.1}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
scnpilot_solids2_trim150_scaffold_56_curated_116
Pseudoalteromonas rubra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138565..139221)
DNA (657bp) protein (219aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=43658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas rubra.;"
pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000345D43D
scnpilot_solids2_trim150_scaffold_56_curated_117
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139227..140195)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003479FA6
Uncharacterized protein {ECO:0000313|EMBL:AHX15476.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative integral membrane protein
scnpilot_solids2_trim150_scaffold_56_curated_118
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140197..140907)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382979C
Membrane protein {ECO:0000313|EMBL:AIF46187.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_56_curated_119
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140904..141671)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000370314B
UPF0271 protein CH75_21295 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein; K07160 UPF0271 protein
scnpilot_solids2_trim150_scaffold_56_curated_120
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141668..142657)
DNA (990bp) protein (330aa)
urea amidolyase-like protein (EC:6.3.4.6); K06350 antagonist of KipI
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E9FA68
Uncharacterized protein {ECO:0000313|EMBL:AIF46185.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Displaying items 91-120 of 315 in total

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