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GWA2_Bacteroidetes_42_15_gwa2_scaffold_372_28

Organism: Bacteroidetes bacterium GWA2_42_15

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(39017..39619)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor id=1881725 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 201.0
  • Bit_score: 394
  • Evalue 4.60e-107
putative ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 200.0
  • Bit_score: 394
  • Evalue 6.50e-107
RNA polymerase sigma70 factor similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 181.0
  • Bit_score: 163
  • Evalue 8.40e-38

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Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 603
ATGAACAGAATATACACCGAACAAACGGAAGACAAATTGACCAGAAAGGGTTTGCAATTGTTGATGGATTTGTATTCTAATGATTTATTCCTGTTCATTAGGGGGATTGTAAACAATAGTGAATCAGCAGAAGAACTGGTGAGTGATGTATTCGTTAAGATATGGAACAAACGTGATACAATCTCCAACATCAATAATATAAAATCCTATCTTTTTATTTTAGCCCGAAATGAGAGTATTTCCTTTATCCGCAAAAATAAACGGGTAAAAATTGTAAATCTTGAAGAAATTGAGGAATACTATTTTGCTCCTCTGGAAAGTGACGGATCAGAACTTTTCAACCAGGATATGATTGATAAAATTAACACAGCTATAGACTTACTTCCAGCCAAATGTAAAATGGCGTTCAGTATGGCTAAAATTAACGGCCTCAAATACAAAGAAATTGCGGAAATCATGAATATTTCTCCATATACAGTAAAAAATCACATTGCCTATGCCCTTGAAAAGATATGTGACTATGTTGGAGTTTCAAATAAGGATAATGTAATTACCAATTCCGATATTCAGTTTTTTCTTTTTGCAGGACGCAAAATACAATGA
PROTEIN sequence
Length: 201
MNRIYTEQTEDKLTRKGLQLLMDLYSNDLFLFIRGIVNNSESAEELVSDVFVKIWNKRDTISNINNIKSYLFILARNESISFIRKNKRVKIVNLEEIEEYYFAPLESDGSELFNQDMIDKINTAIDLLPAKCKMAFSMAKINGLKYKEIAEIMNISPYTVKNHIAYALEKICDYVGVSNKDNVITNSDIQFFLFAGRKIQ*