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GWA2_Bacteroidetes_42_15_gwa2_scaffold_253_104

Organism: Bacteroidetes bacterium GWA2_42_15

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(141052..141582)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=3708404 bin=GWA2_Bacteroidetes_42_15 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 350
  • Evalue 8.80e-94
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 176.0
  • Bit_score: 350
  • Evalue 1.20e-93
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 176.0
  • Bit_score: 177
  • Evalue 3.80e-42

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Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 531
ATGCTGGCTTTTGATCAGGTTTATGAAATATATAGCCATAAACTATTCTCGTTTGTTTTCAAAATCTTAAAGGATGAAACGGATGCCGACGATATTGTACAGGAGGTTTTTGTAAAAATATGGGAATCAAGAGATAAGTTGAAAGATCATAAATTATTGAATTCCTATATCTTCACCATTGCATACAATCACTCTATCAGCCTTATCAGGAAGAGGATTAGCAATAAAAAATACATGGATCACTTGAAAAATTCCTCTGTCATTCAAACTACGCCAACCACTATCAACGAGATTGAATACAACGAACTGGCCAGTAAGGTGGAAAAACTGATTGCAAATTTACCGGAAAGGCAAAAGCAGGTTTACATTTTACACCGGGAGAAAGGCTTAACGTATCCGGAAATTGCAGAGCAAATGGGAATATCCAAAAATACGGTTGAAAACCACATGGTGAAAGCCTTAAAATATCTCCATCAGAACCTGGATAATTCAATGCTGATCAATATACTGTTTATCCATCTCTTCCTCTGA
PROTEIN sequence
Length: 177
MLAFDQVYEIYSHKLFSFVFKILKDETDADDIVQEVFVKIWESRDKLKDHKLLNSYIFTIAYNHSISLIRKRISNKKYMDHLKNSSVIQTTPTTINEIEYNELASKVEKLIANLPERQKQVYILHREKGLTYPEIAEQMGISKNTVENHMVKALKYLHQNLDNSMLINILFIHLFL*