ggKbase home page

GWA2_Bacteroidetes_42_15_gwa2_scaffold_1947_29

Organism: Bacteroidetes bacterium GWA2_42_15

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(31904..32623)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridylate synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 239.0
  • Bit_score: 474
  • Evalue 7.70e-131
ribosomal large subunit pseudouridine synthase B id=1838342 bin=GWE2_Bacteroidetes_42_39 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 474
  • Evalue 5.50e-131
pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 238.0
  • Bit_score: 328
  • Evalue 1.80e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 720
ATGGAAAAGCAGGAACTGATCCGATTAAATAAGTACGTTGCCAATGCAGGCGTTTGTTCGCGTCGCGAGGCCGATGTTATTATTGCCAAAGGATTGGTAAAAGTGAATGGAGTGGTAGTTACCGAAATGGGAATGAAGGTCAGCCTCGACGATGAGGTAATTTACAAGGGTAAATTGCTCAATCCTGAAAAAAAAGTGTACCTGCTGCTTAACAAGCCCAAAGGTTACGTGACGACCCTTGATGATCCGCATGCCGAAAAAACAGTGATGGACCTCGTTTTCAGAGCCTGTACCGAGCGTATTTACCCGGTAGGGCGGCTCGACAAGGATACCACCGGTGTTTTGCTGTTTACCAACGACGGTGAGCTGGCCAAAAAACTCACCCATCCCGGTTACGAAAAGAAGAAGATTTATCATGTTTTTCTTGATAAGGAAATTTCAGAAAAAGAATTACAGCAGATCAGCAAAGGCATTGAACTGGAAGATGGCCCGGTTGCGGCTGATGCTATCAGTTATTCTGATCCGGCTGACCGGAAACAGGTGGGAATTGAAATTCATTCAGGAAGGAACCGTATTGTTCGGCGCATTTTCGAGCATCTGGGCTTTCGGGTAGAGAAACTCGATCGCGTATTGTTTGCAGGGCTGACCAAAAAAGATTTGCCACGCGGGAAATGGCGTTTCCTGAGCGAACGGGAGATCAGTTTTCTTAAGATGAGTTGA
PROTEIN sequence
Length: 240
MEKQELIRLNKYVANAGVCSRREADVIIAKGLVKVNGVVVTEMGMKVSLDDEVIYKGKLLNPEKKVYLLLNKPKGYVTTLDDPHAEKTVMDLVFRACTERIYPVGRLDKDTTGVLLFTNDGELAKKLTHPGYEKKKIYHVFLDKEISEKELQQISKGIELEDGPVAADAISYSDPADRKQVGIEIHSGRNRIVRRIFEHLGFRVEKLDRVLFAGLTKKDLPRGKWRFLSEREISFLKMS*