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GWA2_Bacteroidetes_42_15_gwa2_scaffold_180_61

Organism: Bacteroidetes bacterium GWA2_42_15

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 69581..70150

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=1891284 bin=GWE2_Bacteroidetes_42_39 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 190.0
  • Bit_score: 377
  • Evalue 7.30e-102
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 189.0
  • Bit_score: 377
  • Evalue 1.00e-101
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 185.0
  • Bit_score: 179
  • Evalue 1.10e-42

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Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 570
ATGAATGAATCCGAATTAATCCGACAGGTGCAAAATGGTAATTCCAATGCTTTCCGGTATCTGGTGGCCAGGTATCAAAAGCTGGTTGTACACATCACCGGCCGGGTTATTCAAAGCCAGGAAGATATGGAAGACGTGTGCCAGGACGTGTTTGTCAAGGTTTTCAGGAATATAAGCCGGTTCAAGGGCGATGCAAAATTATCGACATGGATTGCCTCCATCGCGTACAATACCAGTCTCGATTACCTGAAAAAATACAGGAAGAAAGAACTGGATTTTACCGACCGGCTGAAACCGGTTGAAAACGGGGATGCCGACAACTCGCAGGGGCTTGAAAAAAAGGATTTGCACCGGTATATCCGCGAGCAAATTGAACTTTTACCTTTGCATTACCGTTCTGTAGTTACACTCTATCATCTGGAAGAGTTTAATTACAAAGAGATTGAAGAAATTACAGGAATGCCCGAGGGAACAGTGAAAAGCTATCTGCACCGGGCGCGACAATTGTTAAAAGATAAACTTAAATTTGCAGTTACTGACGAGGTTTTAATGGAAGGAGCAATAAGATGA
PROTEIN sequence
Length: 190
MNESELIRQVQNGNSNAFRYLVARYQKLVVHITGRVIQSQEDMEDVCQDVFVKVFRNISRFKGDAKLSTWIASIAYNTSLDYLKKYRKKELDFTDRLKPVENGDADNSQGLEKKDLHRYIREQIELLPLHYRSVVTLYHLEEFNYKEIEEITGMPEGTVKSYLHRARQLLKDKLKFAVTDEVLMEGAIR*