ggKbase home page

RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_25066_3

Organism: Candidatus Muproteobacteria bacterium RBG_16_65_34

near complete RP 45 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 5 / 38
Location: comp(778..3126)

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] Tax=RBG_16_Gamma2_65_34_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 782.0
  • Bit_score: 1539
  • Evalue 0.0
Ribonuclease E n=1 Tax=Thiocapsa marina 5811 RepID=F9UD81_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 845.0
  • Bit_score: 754
  • Evalue 9.00e-215
ribonuclease E similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 810.0
  • Bit_score: 744
  • Evalue 3.40e-212

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Gamma2_65_34_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2349
ATGAAACGTATTCTGTTCAACGCAACTCACCCCGAGGAGTTGCGCCTGGCGATCGTCGATGGCCAGAAACTCCTCGACCTCGATATCGAGTCCTCCACCTACCAACAGAAGAAAGGCAACATCTACAAGGGGAAGGTCACCCGCGTCGAGCCCTCGCTCGAGGCGGCCTTCGTCGACTACGGTTCCGAGCGCCAGGGGTTCCTGCCGCTGAAGGAAATCTCGCGCATCTGTTTCCAGGGCTACGACGAACGCACCCCCATGAGCCAGGTGCGCATCAAGGACGTCATCCGGGAGGGCCAGGAGTTCGTCGTCCAGGTGGACAAGGAGGAGCGCGGCACCAAGGGCGCGGCGCTTACCACCTTCGTCAGCCTCGCCGGCCGCTACCTCGTGCTCATGCCGAACAACCCCCGTGGCGGAGGCATCTCCCGACGCATCGAGGGCGAGGAACGCTCGGAATTGCGCGAGGCCCTGGCCCAGCTGAAGCTGCCCGAGGACTACTCGGTCATCGCCCGCACCGCGGGCATCGGCCGCTCGACGGAAGAGCTCCAGTGGGACTGCGATTACCTGATCGCGCTGTGGGATGCGGTCAGCAAGGCCGCGGCCGAGCGCGCGGCGTCGTTCCTGATCTACCAGGAATCGAACCTCGTCGTGCGCGCGATCCGCGATTACCTGCGCGCGGACATCGGCGAGATCCTCGTGGACAACCCCGAGGTCCACGAGCGCATGAAGAAGTTCGTGCAACAGGTCACGCCGCAGTCGCTCGAGAAGCTCAAGCTCTACCAGGACGAGGTCCCGTTGTTCTCGCGCTTCCAGATCGAGCACCAGATCGAGTCGGCGTTCTCGCGCGAGGTGCGCCTGCCCTCGGGCGGCGCGGTCGTGTTCGACAAGACCGAGGCCCTGGTCACGATCGATGTGAACTCCGCGCGCGCCACCAAGGGCGCGGACATCGAGGAAACCGCGCTCAATACCAACGTCGAGGCGGCCGAGGAGGTCGCGCGCCAGTTGCGGCTGCGCGACCTCGGGGGCCTTATCGTCATCGACTTCATCGATATGACCCCCGAGCGCAACCGGCGCGAGGTGGAGAACCGCCTGACGGAGGCGCTCAAGGTCGACCGCGCGCGCGTGCAGGTCGGGCGCATCTCGCGCTTCGGGCTGCTGGAGATGTCGCGCCAGCGGCTACGGCCCTCGCTCGGCGAGTCCTCGAGTCTCGTCTGCCCGCGCTGCGACGGCACCGGGCATGTCCGCAGCGTCCAGTCCTCGGCGCTCTCGGTGCTGCGCATGGTCCAGGAACAGGCGATGAAGGAGAACACCGCCGCGGTGCACGTGCACCTGCCGGTGGAGACCGCCACCTTCCTGCTAAACGAGAAACGCCTGGAGCTGAGCGCCATCGAGTCGCGCATCGGCACGCCGATCATGATCATCCCGACCGATGAACTCGAGACGCCGCACTACCACATCCGCCGGCTGCGCATCGATGAGTACGAATCCGAGGCCGACGTGCCGAGCTACGACATCGAGCTGATCGAAGAGGAAGAAGAGCAGCAGGCCAAGCCGGCGCCGGCCGCCGCGCCGGTCGCGGAAAAGCCGGTGATCGGGCCGCTCACGCACGTCACTGCGCCCCCGCCTCCGCCTCCGCCGCGCGCGCGCACGGAGCATGAAGGCTGGCTCAAGAGATTCCTGCGCGCGCTCTTCGGTGAGCGCAAAAAAGCAGCGGTACCGGGAGTAAAACCGGAGCAGCGTTTCCCGCGCCACCCCCATCCCCGCCGTCACGAGCGTCACGAGCGCGGGTCCGGGCGCGGTCAGCCGCCGCGGCACGAACGCCACGAACGCGGGCCGCAGCCCCAACCCAGGCAACAACAGGAGGCAGGCAGGTCTCCGCGCCCGCAGGCGCAACAGACCGCGGCCGGTCCGGAAGGCGGCGCCCAAGCGCGCGAGCAGCATCACGAGGGCGGCGGCCGGCGCCGAGGCCGGCGTCGCCGTGGGCGCGGCGGCCAGGAAGGCGGCCGCTCGGGCGGGTTCGGCGCACGGCATGAAAGGCACGAGAATGGCGGCGCCGAGGCCGGCGGAGACCGCGCCAGACCCGCTGGGCAAGTATCGAACAACGCACCTGAGACCGGATCGCACCCGCAGGCGGAACACGACATGGAACAGGCCTCCGGTGCGCGTGCGGACCGGCCCGTGCCGCAACGGCCGGCCATGGAACCTGCTGCACCCGCAGCGTCCCATGAGCCGCGCGAGAGCTGGCGTCCCGAGCCCGTCGCGCCCCGACCGGAGCCCGCCCATACCGACACCGATCGCACCGAGCTTGTCCAGGTGGAGACCCGCTCCGAGCCGACGAAGCAGGATTAG
PROTEIN sequence
Length: 783
MKRILFNATHPEELRLAIVDGQKLLDLDIESSTYQQKKGNIYKGKVTRVEPSLEAAFVDYGSERQGFLPLKEISRICFQGYDERTPMSQVRIKDVIREGQEFVVQVDKEERGTKGAALTTFVSLAGRYLVLMPNNPRGGGISRRIEGEERSELREALAQLKLPEDYSVIARTAGIGRSTEELQWDCDYLIALWDAVSKAAAERAASFLIYQESNLVVRAIRDYLRADIGEILVDNPEVHERMKKFVQQVTPQSLEKLKLYQDEVPLFSRFQIEHQIESAFSREVRLPSGGAVVFDKTEALVTIDVNSARATKGADIEETALNTNVEAAEEVARQLRLRDLGGLIVIDFIDMTPERNRREVENRLTEALKVDRARVQVGRISRFGLLEMSRQRLRPSLGESSSLVCPRCDGTGHVRSVQSSALSVLRMVQEQAMKENTAAVHVHLPVETATFLLNEKRLELSAIESRIGTPIMIIPTDELETPHYHIRRLRIDEYESEADVPSYDIELIEEEEEQQAKPAPAAAPVAEKPVIGPLTHVTAPPPPPPPRARTEHEGWLKRFLRALFGERKKAAVPGVKPEQRFPRHPHPRRHERHERGSGRGQPPRHERHERGPQPQPRQQQEAGRSPRPQAQQTAAGPEGGAQAREQHHEGGGRRRGRRRRGRGGQEGGRSGGFGARHERHENGGAEAGGDRARPAGQVSNNAPETGSHPQAEHDMEQASGARADRPVPQRPAMEPAAPAASHEPRESWRPEPVAPRPEPAHTDTDRTELVQVETRSEPTKQD*