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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_1

Not on your lists

comp(1..288)
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS33433.1}; TaxID=1618927 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_13.;"
hypothetical protein id=74980 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_2

Not on your lists

comp(294..599)
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS33432.1}; TaxID=1618927 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_13.;"
coiled-coil id=5226881 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

700..3456
DNA (2757bp) protein (919aa)
glgB; 1,4-Alpha-glucan branching enzyme Tax=GWE2_Bacteroidetes_40_63_curated
alpha amylase catalytic subunit id=1825126 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
alpha-amylase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5127..6107
DNA (981bp) protein (327aa)
Spore coat protein H id=1825127 bin=GWD2_Bacteroidetes_40_43 species=Flammeovirga yaeyamensis genus=Flammeovirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
spore coat protein CotH Tax=GWE2_Bacteroidetes_40_63_curated
spore coat protein CotH
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6718..7332
DNA (615bp) protein (205aa)
Putative membrane protein id=2861033 bin=GWF2_Bacteroidetes_40_13 species=Aequorivita sublithincola genus=Aequorivita taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7277..7414)
DNA (138bp) protein (46aa)
id=1825131 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1825131 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7459..9612
DNA (2154bp) protein (718aa)
signal transduction histidine kinase Tax=GWE2_Bacteroidetes_40_63_curated
Tetratricopeptide repeat domain protein id=2026309 bin=GWE2_Bacteroidetes_40_63 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
signal transduction histidine kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9620..10084)
DNA (465bp) protein (155aa)
GAF domain-containing protein id=1825135 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
GAF domain-containing protein; K07170 GAF domain-containing protein Tax=GWE2_Bacteroidetes_40_63_curated
histidine kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10245..11375)
DNA (1131bp) protein (377aa)
Saccharopine dehydrogenase id=1825137 bin=GWD2_Bacteroidetes_40_43 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Saccharopine dehydrogenase-like protein Tax=GWE2_Bacteroidetes_40_63_curated
Saccharopine dehydrogenase-like protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11533..13551
DNA (2019bp) protein (673aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=1825142 bin=GWD2_Bacteroidetes_40_43 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13561..15465
DNA (1905bp) protein (635aa)
transglutaminase Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=2861061 bin=GWF2_Bacteroidetes_40_13 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15476..16396)
DNA (921bp) protein (307aa)
Putative uncharacterized protein id=2861068 bin=GWF2_Bacteroidetes_40_13 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16469..16786)
DNA (318bp) protein (106aa)
thioredoxin id=4858382 bin=GWC2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
thioredoxin; K03671 thioredoxin 1 Tax=GWE2_Bacteroidetes_40_63_curated
thioredoxin
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16874..21250)
DNA (4377bp) protein (1459aa)
DNA polymerase III, alpha subunit (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=GWE2_Bacteroidetes_40_63_curated
DNA polymerase III, alpha subunit id=1825155 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
DNA polymerase III subunit alpha
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21260..21433
DNA (174bp) protein (58aa)
id=1825158 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1825158 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21430..22125)
DNA (696bp) protein (232aa)
id=1825159 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1825159 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22211..22873)
DNA (663bp) protein (221aa)
rhomboid family protein id=4858526 bin=GWC2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
membrane protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22997..24574)
DNA (1578bp) protein (526aa)
peptide chain release factor 3; K02837 peptide chain release factor 3 Tax=GWE2_Bacteroidetes_40_63_curated
Peptide chain release factor 3 id=1825164 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
peptide chain release factor 3
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24903..27458
DNA (2556bp) protein (852aa)
TonB-linked outer membrane protein, SusC/RagA family Tax=GWE2_Bacteroidetes_40_63_curated
SusC/RagA family TonB-linked outer membrane protein id=2861292 bin=GWF2_Bacteroidetes_40_13 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
TonB-linked outer membrane protein, SusC/RagA family
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_20
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27455..29170)
DNA (1716bp) protein (572aa)
nucleotide kinase-like protein Tax=GWE2_Bacteroidetes_40_63_curated
Nucleotide kinase-like protein id=1777651 bin=GWD2_Bacteroidetes_40_43 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
nucleotide kinase-like protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29483..29794)
DNA (312bp) protein (104aa)
DNA polymerase beta domain protein region id=2026286 bin=GWE2_Bacteroidetes_40_63 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
DNA polymerase beta domain-containing protein Tax=GWE2_Bacteroidetes_40_63_curated
DNA polymerase beta domain-containing protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_22
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29770..30066)
DNA (297bp) protein (99aa)
HEPN domain protein id=2026283 bin=GWE2_Bacteroidetes_40_63 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
HEPN domain-containing protein Tax=GWE2_Bacteroidetes_40_63_curated
HEPN domain-containing protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30287..31594)
DNA (1308bp) protein (436aa)
GTPase Der id=1777648 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
GTP-binding protein engA; K03977 GTP-binding protein Tax=GWE2_Bacteroidetes_40_63_curated
GTP-binding protein Der
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31651..32532)
DNA (882bp) protein (294aa)
GTPase Era id=2861303 bin=GWF2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
GTP-binding protein era; K03595 GTP-binding protein Era Tax=GWE2_Bacteroidetes_40_63_curated
GTPase Era
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32757..34001
DNA (1245bp) protein (415aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=1777646 bin=GWD2_Bacteroidetes_40_43 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34065..34481)
DNA (417bp) protein (139aa)
Uncharacterized protein id=1777645 bin=GWD2_Bacteroidetes_40_43 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_27
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34485..35012)
DNA (528bp) protein (176aa)
Putative uncharacterized protein id=1777644 bin=GWD2_Bacteroidetes_40_43 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35275..36123)
DNA (849bp) protein (283aa)
rluB; ribosomal large subunit pseudouridine synthase B; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=GWE2_Bacteroidetes_40_63_curated
Pseudouridine synthase id=1777643 bin=GWD2_Bacteroidetes_40_43 species=Prevotella ruminicola genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
rluB; ribosomal large subunit pseudouridine synthase B
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36187..37308)
DNA (1122bp) protein (374aa)
Putative Fe-S center protein id=1777642 bin=GWD2_Bacteroidetes_40_43 species=Marinitoga piezophila genus=Marinitoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
putative Fe-S center protein; K07138 Tax=GWE2_Bacteroidetes_40_63_curated
Fe-S center protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_345_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38151..41486
DNA (3336bp) protein (1112aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Uncharacterized protein id=1777641 bin=GWD2_Bacteroidetes_40_43 species=Chryseobacterium sp. CF314 genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
uncharacterized protein
Displaying items 1-30 of 31 in total

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