ggKbase home page

RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..1831
DNA (1830bp) protein (610aa)
PAS domain S-box id=4310803 bin=GWF2_Bacteroidetes_40_13 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
PAS domain S-box Tax=GWE2_Bacteroidetes_40_63_curated
PAS domain S-box
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1819..2775)
DNA (957bp) protein (319aa)
Serine/threonine protein kinase id=1940127 bin=GWD2_Bacteroidetes_40_43 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
serine/threonine protein kinase Tax=GWE2_Bacteroidetes_40_63_curated
serine/threonine protein kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2998..10077)
DNA (7080bp) protein (2360aa)
Uncharacterized protein id=4310799 bin=GWF2_Bacteroidetes_40_13 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10166..11173
DNA (1008bp) protein (336aa)
aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Tax=GWE2_Bacteroidetes_40_63_curated
aspartate-semialdehyde dehydrogenase id=1940129 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
aspartate-semialdehyde dehydrogenase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11356..13239
DNA (1884bp) protein (628aa)
Glycoside hydrolase, family 20, catalytic core Tax=GWE2_Bacteroidetes_40_63_curated
Glycoside hydrolase, family 20, catalytic core id=4310795 bin=GWF2_Bacteroidetes_40_13 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Glycoside hydrolase, family 20, catalytic core
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13579..14691
DNA (1113bp) protein (371aa)
Uncharacterized protein id=1940189 bin=GWD2_Bacteroidetes_40_43 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14812..15249)
DNA (438bp) protein (146aa)
Protozoan/cyanobacterial globin-like protein id=1940192 bin=GWD2_Bacteroidetes_40_43 species=Arcobacter butzleri genus=Arcobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein; K06886 hemoglobin Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15292..17064)
DNA (1773bp) protein (591aa)
multidrug ABC transporter ATPase and permease Tax=GWE2_Bacteroidetes_40_63_curated
ABC-type multidrug transport system, ATPase and permease component id=1940195 bin=GWD2_Bacteroidetes_40_43 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
multidrug ABC transporter ATPase and permease
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17283..17702
DNA (420bp) protein (140aa)
Putative uncharacterized protein id=1940198 bin=GWD2_Bacteroidetes_40_43 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18001..19143)
DNA (1143bp) protein (381aa)
Chaperone protein dnaJ id=1940201 bin=GWD2_Bacteroidetes_40_43 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
molecular chaperone DnaJ; K03686 molecular chaperone DnaJ Tax=GWE2_Bacteroidetes_40_63_curated
molecular chaperone DnaJ
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19154..19861)
DNA (708bp) protein (236aa)
Protein grpE; K03687 molecular chaperone GrpE Tax=GWE2_Bacteroidetes_40_63_curated
Protein grpE id=1940204 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
molecular chaperone GrpE
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19925..20461)
DNA (537bp) protein (179aa)
Thiol-disulfide isomerase-like thioredoxin id=4223540 bin=GWC2_Bacteroidetes_40_13 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
thiol-disulfide isomerase-like thioredoxin Tax=GWE2_Bacteroidetes_40_63_curated
alkyl hydroperoxide reductase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20644..21951)
DNA (1308bp) protein (436aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=GWE2_Bacteroidetes_40_63_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase id=4223541 bin=GWC2_Bacteroidetes_40_13 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22248..22622
DNA (375bp) protein (125aa)
Uncharacterized protein id=4310778 bin=GWF2_Bacteroidetes_40_13 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22893..23486
DNA (594bp) protein (198aa)
glutaredoxin-like protein id=1940213 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Glutaredoxin-like protein, YruB-family Tax=GWE2_Bacteroidetes_40_63_curated
glutaredoxin-like protein, YruB-family
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23554..23841
DNA (288bp) protein (96aa)
Co-chaperonin GroES (HSP10) id=4310774 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
chaperonin Cpn10; K04078 chaperonin GroES Tax=GWE2_Bacteroidetes_40_63_curated
chaperonin Cpn10
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24428..25141
DNA (714bp) protein (238aa)
Putative uncharacterized protein id=4731392 bin=GWA2_Bacteroidetes_40_14 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein; K06911 Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25310..25555
DNA (246bp) protein (82aa)
Putative uncharacterized protein id=1940216 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Putative uncharacterized protein Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25588..26631)
DNA (1044bp) protein (348aa)
hypothetical protein
hypothetical protein MsalJ2_10743 id=4310766 bin=GWF2_Bacteroidetes_40_13 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein MsalJ2_10743 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_20
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26850..28181)
DNA (1332bp) protein (444aa)
Glutamate dehydrogenase (NADP(+)) (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Tax=GWE2_Bacteroidetes_40_63_curated
Glutamate dehydrogenase (NADP(+)) (EC:1.4.1.4)
Glutamate dehydrogenase id=2062818 bin=GWE2_Bacteroidetes_40_63 species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28597..32085
DNA (3489bp) protein (1163aa)
id=1940219 Tax=GWE2_Bacteroidetes_40_63_curated
id=1940219 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_22
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32148..33527
DNA (1380bp) protein (460aa)
diphosphate--fructose-6-phosphate 1-phosphotransferase; K00895 pyrophosphate--fructose-6-phosphate 1-phosphotransferase [EC:2.7.1.90] Tax=GWE2_Bacteroidetes_40_63_curated
diphosphate--fructose-6-phosphate 1-phosphotransferase (EC:2.7.1.90)
Diphosphate--fructose-6-phosphate 1-phosphotransferase id=1940220 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33602..36325)
DNA (2724bp) protein (908aa)
Endoglucanase Tax=GWE2_Bacteroidetes_40_63_curated
glycoside hydrolase family protein id=1940221 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
glycosyl hydrolase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37182..38378
DNA (1197bp) protein (399aa)
Putative uncharacterized protein id=1940223 bin=GWD2_Bacteroidetes_40_43 species=Formosa sp. AK20 genus=Formosa taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38540..41047
DNA (2508bp) protein (836aa)
ATP-dependent protease La Tax=GWE2_Bacteroidetes_40_63_curated
ATP-dependent protease La id=4533159 bin=GWC2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Lon protease
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41126..41671)
DNA (546bp) protein (182aa)
Glutathione peroxidase (EC:1.11.1.9) Tax=GWE2_Bacteroidetes_40_63_curated
glutathione peroxidase-like protein bsaA id=1940225 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_27
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41994..43313
DNA (1320bp) protein (440aa)
ammonium transporter id=4310726 bin=GWF2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
amt-3; ammonium transporter; K03320 ammonium transporter, Amt family Tax=GWE2_Bacteroidetes_40_63_curated
amt-3; ammonium transporter
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43510..43860
DNA (351bp) protein (117aa)
P-II family protein id=1940227 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
P-II family protein; K04751 nitrogen regulatory protein P-II 1 Tax=GWE2_Bacteroidetes_40_63_curated
P-II family protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43952..45145)
DNA (1194bp) protein (398aa)
Uncharacterized protein id=1940254 bin=GWD2_Bacteroidetes_40_43 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
ATPase AAA; K07133 Tax=GWE2_Bacteroidetes_40_63_curated
ATPase AAA
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_49_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45504..46076)
DNA (573bp) protein (191aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] Tax=GWE2_Bacteroidetes_40_63_curated
Penicillin-binding protein 4 id=1940255 bin=GWD2_Bacteroidetes_40_43 species=Cecembia lonarensis genus=Cecembia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
monofunctional biosynthetic peptidoglycan transglycosylase
Displaying items 1-30 of 94 in total

View Taxonomy