ggKbase home page

RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71

Search features with annotation key words

Displaying items 61-90 of 174 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_61
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

64779..65729
DNA (951bp) protein (317aa)
putative diacylglycerol kinase catalytic domain-containing protein id=2047202 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_62
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

65864..68131
DNA (2268bp) protein (756aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein AtheD1_05225 id=2047205 bin=GWD2_Bacteroidetes_40_43 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
phosphate permease
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_63
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

68589..71324
DNA (2736bp) protein (912aa)
TonB-dependent receptor protein Tax=GWE2_Bacteroidetes_40_63_curated
TonB-dependent receptor id=2047208 bin=GWD2_Bacteroidetes_40_43 species=Bacteroides fluxus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
putative TonB-dependent receptor protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_64
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

71353..72582
DNA (1230bp) protein (410aa)
Uncharacterized protein id=2047210 bin=GWD2_Bacteroidetes_40_43 species=Bacteroides coprocola genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_65
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

72800..73492
DNA (693bp) protein (231aa)
Putative uncharacterized protein id=3214673 bin=GWC2_Bacteroidetes_40_13 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
two-component system response regulator Tax=GWE2_Bacteroidetes_40_63_curated
two-component system response regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_66
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

73614..75392
DNA (1779bp) protein (593aa)
integral membrane sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=GWE2_Bacteroidetes_40_63_curat
Integral membrane sensor signal transduction histidine kinase id=2047228 bin=GWD2_Bacteroidetes_40_43 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
histidine kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_67
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(75520..77139)
DNA (1620bp) protein (540aa)
Adenylate cyclase id=4053711 bin=GWF2_Bacteroidetes_40_13 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
adenylate/guanylate cyclase Tax=GWE2_Bacteroidetes_40_63_curated
adenylate/guanylate cyclase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_68
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(77622..78995)
DNA (1374bp) protein (458aa)
id=2047230 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=2047230 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_69
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(79018..80061)
DNA (1044bp) protein (348aa)
id=2047231 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=2047231 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_70
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(80080..81522)
DNA (1443bp) protein (481aa)
hypothetical protein MzeaS_05105 id=2047233 bin=GWD2_Bacteroidetes_40_43 species=Formosa sp. AK20 genus=Formosa taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_71
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(81535..84750)
DNA (3216bp) protein (1072aa)
TonB-dependent receptor plug Tax=GWE2_Bacteroidetes_40_63_curated
TonB-dependent receptor plug id=1851910 bin=GWE2_Bacteroidetes_40_63 species=Formosa sp. AK20 genus=Formosa taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
TonB-dependent receptor plug
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_72
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(85061..86755)
DNA (1695bp) protein (565aa)
glutamate formiminotransferase (EC:2.1.2.5); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] Tax=GWE2_Bacteroidetes_40_63_curated
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formiminotransferase id=2047236 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_73
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(86863..88110)
DNA (1248bp) protein (416aa)
imidazolonepropionase (EC:3.5.2.7); K01468 imidazolonepropionase [EC:3.5.2.7] Tax=GWE2_Bacteroidetes_40_63_curated
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase id=2047238 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_74
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

88943..90247
DNA (1305bp) protein (435aa)
Surface antigen (D15) id=4527777 bin=GWF2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_75
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

90463..92721
DNA (2259bp) protein (753aa)
multi-sensor hybrid histidine kinase Tax=GWE2_Bacteroidetes_40_63_curated
Multi-sensor hybrid histidine kinase id=2047242 bin=GWD2_Bacteroidetes_40_43 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
multi-sensor hybrid histidine kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_76
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

92774..95602
DNA (2829bp) protein (943aa)
multi-sensor hybrid histidine kinase Tax=GWE2_Bacteroidetes_40_63_curated
Multi-sensor hybrid histidine kinase id=4527779 bin=GWF2_Bacteroidetes_40_13 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
multi-sensor hybrid histidine kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_77
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

95704..96093
DNA (390bp) protein (130aa)
Putative two component sigma-54 specific transcriptional regulator id=4527780 bin=GWF2_Bacteroidetes_40_13 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
response regulator receiver protein Tax=GWE2_Bacteroidetes_40_63_curated
regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_78
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(96118..96780)
DNA (663bp) protein (221aa)
Gliding motility-related protein; possible outer membrane protein id=2047248 bin=GWD2_Bacteroidetes_40_43 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
outer membrane lipoprotein carrier protein LolA Tax=GWE2_Bacteroidetes_40_63_curated
outer membrane lipoprotein carrier protein LolA
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_79
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(96859..99396)
DNA (2538bp) protein (846aa)
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=GWE2_Bacteroidetes_40_63_curated
DNA translocase FtsK id=4527782 bin=GWF2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
DNA translocase FtsK
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_80
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(99761..100447)
DNA (687bp) protein (229aa)
hypothetical protein MsalJ2_05068 id=2047253 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein MsalJ2_05068 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_81
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

100742..101722
DNA (981bp) protein (327aa)
Carbamate kinase (EC:2.7.2.2); K00926 carbamate kinase [EC:2.7.2.2] Tax=GWE2_Bacteroidetes_40_63_curated
carbamate kinase (EC:2.7.2.2)
carbamate kinase-like carbamoyl phosphate synthetase id=4704419 bin=GWC2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_82
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

101818..102822
DNA (1005bp) protein (335aa)
Ornithine carbamoyltransferase (EC:2.1.3.3); K00611 ornithine carbamoyltransferase [EC:2.1.3.3] Tax=GWE2_Bacteroidetes_40_63_curated
Ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase id=4852070 bin=GWA2_Bacteroidetes_40_14 species=Neisseria weaveri genus=Neisseria taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_83
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

103039..105843
DNA (2805bp) protein (935aa)
prolyl oligopeptidase family protein Tax=GWE2_Bacteroidetes_40_63_curated
Dipeptidyl aminopeptidase/acylaminoacyl peptidase id=2047262 bin=GWD2_Bacteroidetes_40_43 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_84
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

106016..108043
DNA (2028bp) protein (676aa)
sodium/hydrogen exchanger Tax=GWE2_Bacteroidetes_40_63_curated
Uncharacterized protein id=2047267 bin=GWD2_Bacteroidetes_40_43 species=Barnesiella intestinihominis genus=Barnesiella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
sodium:proton antiporter
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_85
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(108045..109319)
DNA (1275bp) protein (425aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=GWE2_Bacteroidetes_40_63_curated
PUA domain-containing protein id=2047270 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
SAM-dependent methyltransferase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_86
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(109261..109842)
DNA (582bp) protein (194aa)
3''''-5'''' exonuclease id=4527867 bin=GWF2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
3'-5' exonuclease Tax=GWE2_Bacteroidetes_40_63_curated
3'-5' exonuclease
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_87
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(109835..110494)
DNA (660bp) protein (220aa)
hypothetical protein AnHS1_01071 id=2047278 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_88
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(110665..111783)
DNA (1119bp) protein (373aa)
glycosyl transferase family 2 id=1851952 bin=GWE2_Bacteroidetes_40_63 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
family 2 glycosyl transferase Tax=GWE2_Bacteroidetes_40_63_curated
family 2 glycosyl transferase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_89
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(111837..112556)
DNA (720bp) protein (240aa)
6-phosphogluconolactonase; K01057 6-phosphogluconolactonase [EC:3.1.1.31] Tax=GWE2_Bacteroidetes_40_63_curated
pgl; 6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase id=2047301 bin=GWD2_Bacteroidetes_40_43 species=Flavobacteriaceae bacterium HQM9 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_71_90
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(112667..114190)
DNA (1524bp) protein (508aa)
zwf; glucose-6-phosphate 1-dehydrogenase; K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] Tax=GWE2_Bacteroidetes_40_63_curated
Glucose-6-phosphate 1-dehydrogenase id=2047302 bin=GWD2_Bacteroidetes_40_43 species=uncultured bacterium W5-47b genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
glucose-6-phosphate dehydrogenase
Displaying items 61-90 of 174 in total

View Taxonomy