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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_257_48

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: 50210..50764

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=2083847 bin=GWD2_Bacteroidetes_40_43 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 185.0
  • Bit_score: 367
  • Evalue 7.30e-99
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 367
  • Evalue 1.30e-98
RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 178.0
  • Bit_score: 158
  • Evalue 1.90e-36

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Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 555
TTGGAGCATCAAATTACATTGCAACAACTATTAATTGAAAAATGCAAACGGGGCGACACGCAGGCACAGCATGAATTGTACAAGCAATATGTCCATGCCATGTATAATGTGGCCTATCGCATTTGCGGTAATCGTTACGATGCCGAAGATGTGTTGCAGGAATCGTTCCTGAAAGCTTTTACGAAATTGAGTTCTTTTAAAGGCGAGGCCTCTTTTGGCAGTTGGCTCAAGCGGATTGTGGTAAACCAAAGCATTACGGCCATGCGAAGCCGTAAAGGATTTTTAAGCCCACTGACCCCAGCCATTGAATCGAATACAAAGGAAGAGGCTGATACATGGATTGATGAGGATTTTCCGATGGAAAAGGTGATTCAGGCCATTGAGTCGCTGCCCGATGGCGCCCGGACAGTGTTTACACTCAAAGCCATTGAGGAATATAAGTTTAGCGAGATTTCAGAAATGCTCGGGCTTTCTGAAACCAATTGTAAAGTGCAGTACCACCGTTCGAAAAAGCTTTTGAATGAAAAATTAAAGGTTCTGGTGGCCGAAAATTAG
PROTEIN sequence
Length: 185
LEHQITLQQLLIEKCKRGDTQAQHELYKQYVHAMYNVAYRICGNRYDAEDVLQESFLKAFTKLSSFKGEASFGSWLKRIVVNQSITAMRSRKGFLSPLTPAIESNTKEEADTWIDEDFPMEKVIQAIESLPDGARTVFTLKAIEEYKFSEISEMLGLSETNCKVQYHRSKKLLNEKLKVLVAEN*