ggKbase home page

RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_443_18

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: comp(18469..19218)

Top 3 Functional Annotations

Value Algorithm Source
Putative capsular polysaccharide biosynthesis protein id=2148580 bin=GWD2_Bacteroidetes_40_43 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 250.0
  • Bit_score: 507
  • Evalue 1.00e-140
capsular polysaccharide biosynthesis protein Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 249.0
  • Bit_score: 507
  • Evalue 1.50e-140
capsular biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 249.0
  • Bit_score: 225
  • Evalue 1.70e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 750
ATGAACATCCTGGGAAAGATATTTCAAAAAAAAGAACCACTGGTTCCGGTAGATTTATCTTTCCTGGGAGGTGACATTCATTCCCATTTAATTCCCGGGATTGACGATGGTTCGCCATCCATGTCCGATTCATTGGTACTGGCGCAAGGGATGGTCGATTTGGGTTATCAAAAAGCGGTAACCACCCCCCACGTGATGAGCGACTTTTACCGCAACACACCCGAAATCATCAAAAAGGGATTGTTGCAATTGAACGGGGCCATAAAAAATGCTGGAATAAAGCTTACCGTGGAAGCCGCCGCCGAATATTATATTGACTACGATTTTTTGAAAAAAATTGGCAATGAGGAACTGTTAACTTTTGGCCAGCGTTATGTTTTGGTGGAATTTTCATTCGTGGAACCACCCAGAAACATGAAAGAAGCTTTTTTTGAATTACAGACCAATGGTTACAAGCCCATCCTAGCCCATCCCGAAAGGTATTTATATTGGAATCAGAATCCCAAAGAACTGCTGGAATTGAAAGATCGCGACGTGCTTTTTCAGGTCAATCTTTTATCATTATTTGGGAATTATGGCCCTGAAATTTGCCGGGCCGGAGAGTTCCTTATTGAGCACCGTTTGGTGGAATGGCTAGGGACCGATATGCACCATGCCAACCATTTGATAAATCTTAAAAACTACCAGCTAAAGGCAAGCCTAGTTGAAAAGATTCATCAGCTTCCGCTGCTTAACCAAAACCTTTTGTAG
PROTEIN sequence
Length: 250
MNILGKIFQKKEPLVPVDLSFLGGDIHSHLIPGIDDGSPSMSDSLVLAQGMVDLGYQKAVTTPHVMSDFYRNTPEIIKKGLLQLNGAIKNAGIKLTVEAAAEYYIDYDFLKKIGNEELLTFGQRYVLVEFSFVEPPRNMKEAFFELQTNGYKPILAHPERYLYWNQNPKELLELKDRDVLFQVNLLSLFGNYGPEICRAGEFLIEHRLVEWLGTDMHHANHLINLKNYQLKASLVEKIHQLPLLNQNLL*