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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_884_23

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: 22958..23530

Top 3 Functional Annotations

Value Algorithm Source
ECF sigma factor SigX id=1921864 bin=GWD2_Bacteroidetes_40_43 species=Flavobacteriales bacterium ALC-1 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 389
  • Evalue 1.40e-105
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 190.0
  • Bit_score: 389
  • Evalue 2.00e-105
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 179.0
  • Bit_score: 143
  • Evalue 5.00e-32

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Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 573
ATGGATAAGAAATCCGCTAAATCATTGACTGATGAGCAAATAATTGATAAAATCTTAAAAGATTCGAATCAGGAATTATTTGGGATACTTTATCAACGGCACCATCCTAAGGTGATGGACAAATGTTATGGTTTTATTAAAAATAAGAATTTAGCTACTGAGTTTGCTGAAGAAATTTTTGCAAAAACCTACGAGAAATTAAACACTTTCAACCATTCTTCGAAATTTTCGTCGTGGCTGTATTCCATCACCTATAATTATTGCATTGATTATTTACGGCAACGCAAAAAACTGCATTACCCGGATTGGAACCGCCAAAATGAGATTCCTGAAATTATTGATGAGACCGAGGAAGATTTTACCGATTTGAATTATCAACGTCTGATGGAAATTTTTGAGTTGATACACCCAGAGGAAAAAGCGTTGCTTTACATGAAGTATCAGGACAACCTGCCCATGAAGCAAATTGCTGTGGCTTTGCGCGTAAGCGAGGATGCTGCAAAAATGCGCCTAAAACGGGCCCGCACCCGGGTTATTTATTTATATCGTACCAAATTTGGCCCACTGGTCTAA
PROTEIN sequence
Length: 191
MDKKSAKSLTDEQIIDKILKDSNQELFGILYQRHHPKVMDKCYGFIKNKNLATEFAEEIFAKTYEKLNTFNHSSKFSSWLYSITYNYCIDYLRQRKKLHYPDWNRQNEIPEIIDETEEDFTDLNYQRLMEIFELIHPEEKALLYMKYQDNLPMKQIAVALRVSEDAAKMRLKRARTRVIYLYRTKFGPLV*