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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1368_2

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: 3590..4096

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 168.0
  • Bit_score: 333
  • Evalue 1.50e-88
ECF subfamily RNA polymerase sigma-24 subunit id=4333517 bin=GWF2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 319
  • Evalue 2.70e-84
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 160.0
  • Bit_score: 212
  • Evalue 7.70e-53

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Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 507
TTGTGGGAAGCCATTAAAAAAATGAACATAGAAGATTACAACAAGGCGGTCGATTTGTATTCCGATGGTGTGTACCGGTTTATTCTGAAAAACATTAAAGATTCAGAAAAAGCAAAAGACATTGTTCAGGATACATTTGAAAAGCTGTGGGTAAATGCCGGAAATGTGAATTTCCTGAAAGTAAAGAGTTACATCTTTACTGCCGCCTATCACACGATGATTGACCTTATCCGCAAAGAAAAACGGATGACCGATTTCGAAAATGTGCGAGAAGACAAATATTCCCACAGCAAACAATACTCCGACTTGAGCGAGATACTCAACGAGGCATTGAGTAAACTGAACGAAACGCAACGTTCCTTAATCATGCTCCGCGACTATGAAGGGTACTCATACCAAGAGATTGGAGAAATTACAGGGCTGAGTGAAGCGCAGGTAAAAGTTTACATCTTCAGGGCCCGGGTGTTTTTAAAAGAATACATAGGAAGTGTGGATGCTGTTATTTAA
PROTEIN sequence
Length: 169
LWEAIKKMNIEDYNKAVDLYSDGVYRFILKNIKDSEKAKDIVQDTFEKLWVNAGNVNFLKVKSYIFTAAYHTMIDLIRKEKRMTDFENVREDKYSHSKQYSDLSEILNEALSKLNETQRSLIMLRDYEGYSYQEIGEITGLSEAQVKVYIFRARVFLKEYIGSVDAVI*