ggKbase home page

RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_8110_6

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: comp(3715..4548)

Top 3 Functional Annotations

Value Algorithm Source
Transposase (Fragment) n=1 Tax=uncultured bacterium RepID=K2AZH6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 267.0
  • Bit_score: 319
  • Evalue 4.50e-84
Transposase {ECO:0000313|EMBL:KKQ59373.1}; TaxID=1618949 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_38_18.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 277.0
  • Bit_score: 497
  • Evalue 1.70e-137
integrase core domain protein similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 281.0
  • Bit_score: 278
  • Evalue 2.50e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE2_OD1_38_18 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGGATATCAGTACACTATGTTCAATTGATAATGTTTCAAGAAGCGGTTACTATCGCTGGTTAGCACACTCTGGAGAAGTACCTAAGGATTATAATGATTATTTACTGATTAAAGAGATATTCGATGGTGGCAAGAAAAAATATGGTTGGCGCTCAATTCAAATGCACCTACCTAAAAATGTAGTCATGAACCACAAAAAGATTAAGCGTATTATGAAAAAATATCAGTTGGTTTGTAGAATACGTCGCGCTAACCCATACAAGCAAATGGCTAAGAAAACTCAGGAACATCGCACATTCAACAATCATTTAAATCGAGAATTTAAATCACTTATGCCATTCAAAGTGTTCTGTACCGACATTACCTATTTGCCATTTAATCATCGAATGGCCTATTTATCAGTCATTAAGGATATTGGTAGTGGCGAGATTGTAGCCTGGAAATTGTCACTGCATATTGATATGGAATTGGTGCTAGAAACGGTTGAACGACTCAAGGACAATACAGCCTTGCCCCTCAAATCGCTTCAAAATATCATGATACATTCTGACCAGGGTTTCCATTATACCAACCCACAGTATATCTGGCAGATCAAAAAGATGAACATGATGCAGTCTATGTCGCGTAAGGGAAATTGTATTGATAATTCACCCATGGAATCCTTCTTCGGCCATTTTAAAGATGATGTTGATTACAAGAGTTGCAAAACATTTGAAGATCTAAATATCTTAATTGAAGAATATATGCAATACTACAATTACGAACGCTATCAATGGAATCTAAAAAAGATGACCCCGGTAGAGTACCGAAATCATCTTTTAGAAACCGCTTAG
PROTEIN sequence
Length: 278
MDISTLCSIDNVSRSGYYRWLAHSGEVPKDYNDYLLIKEIFDGGKKKYGWRSIQMHLPKNVVMNHKKIKRIMKKYQLVCRIRRANPYKQMAKKTQEHRTFNNHLNREFKSLMPFKVFCTDITYLPFNHRMAYLSVIKDIGSGEIVAWKLSLHIDMELVLETVERLKDNTALPLKSLQNIMIHSDQGFHYTNPQYIWQIKKMNMMQSMSRKGNCIDNSPMESFFGHFKDDVDYKSCKTFEDLNILIEEYMQYYNYERYQWNLKKMTPVEYRNHLLETA*