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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_220_36

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: comp(41653..42513)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor rpoD id=4373717 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 287.0
  • Bit_score: 548
  • Evalue 3.60e-153
RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 286.0
  • Bit_score: 548
  • Evalue 5.00e-153
RNA polymerase, sigma 70 subunit, RpoD subfamily similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 286.0
  • Bit_score: 502
  • Evalue 8.30e-140

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Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 861
ATGAGACAACTAAAAATCACCAAGTCAATTACTAATCGTGAAAGTGCTTCGCTTGATAAGTATTTGCAAGAGATTGGGAAGGAAGAGTTGATTACCGTTGAAGAGGAGGTTGAGTTAGCACAGCGCATCCGTAAAGGTGATAGAATTGCTTTAGAAAAGCTTACCAAAGCCAATCTTAGGTTTGTGGTTTCGGTAGCAAAACAATACCAAAACCAGGGATTGAGCCTTCCAGATTTGATTAACGAAGGGAACCTGGGTTTGATTAAAGCGGCTGAGAAATTTGATGAGACCCGTGGTTTTAAATTTATTTCTTATGCCGTTTGGTGGATCCGTCAATCCATTCTTCAAGCTTTGGCTGAGCAATCGCGTATTGTAAGGCTACCATTGAACCAAGTGGGTTCTTTGAATAAAATCAATAAAGCTTATTCCAAATTTGAGCAGGAAAACGAACGGACCCCTTCACCTGAAGAATTAGCCGGCGCTTTAGATTTGCCCAAAGATAAAGTTATTGATACATTGCGTGTTTCGGGCCGCCATATTTCGGTGGATGCCCCTTTTGTGGAGGGCGAAGATAACAGCTTGCTCGATGTGCTGGAGAACAAAGATTCCCCAATTGCCGATACCCAACTGATGAGCGAATCGTTGAGCCGTGAAATTGAGCGGGCCCTGGCTACATTAACTGAAAGAGAACGCGACATCATACGTCTGTTTTTTGGGATTGCATGCCAGGAGATGACGTTGGAAGAGATTGGTGAAAAATTTGGATTGACACGTGAAAGGGTCCGCCAGATTAAAGAAAAAGCCATCCGCAGGTTGCGCCATACCTCACGAAGTAAATTGTTAAAGACATATTTAGGATAA
PROTEIN sequence
Length: 287
MRQLKITKSITNRESASLDKYLQEIGKEELITVEEEVELAQRIRKGDRIALEKLTKANLRFVVSVAKQYQNQGLSLPDLINEGNLGLIKAAEKFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNQVGSLNKINKAYSKFEQENERTPSPEELAGALDLPKDKVIDTLRVSGRHISVDAPFVEGEDNSLLDVLENKDSPIADTQLMSESLSREIERALATLTERERDIIRLFFGIACQEMTLEEIGEKFGLTRERVRQIKEKAIRRLRHTSRSKLLKTYLG*