ggKbase home page

RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_312_1

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: comp(2..520)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase id=1871936 bin=GWD2_Bacteroidetes_40_43 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 173.0
  • Bit_score: 344
  • Evalue 8.10e-92
dihydrouridine synthase dus Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 173.0
  • Bit_score: 344
  • Evalue 1.10e-91
dihydrouridine synthase dus similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 172.0
  • Bit_score: 227
  • Evalue 3.10e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 519
ATGAATTTTTGGCAAACATCGCGGACTCCTTTCTTTATTCTGGCACCCATGGAAGATGTGACCGATACCGTCTTCCGCGAAGTGGTGCTTTCAGTTTCCGACCCTTCGGTTTTGAATGTTTTGTTTACTGAGTTTACTTCGGTAGATGGTCTTTTGGATGAACGGGGGCATGAAAGTGTAGCCCAACGTTTAAAAGTGAGTGCATCGGAACAACAGCTTCTGAGGGACAGAGATACCAAATTGGTGGCACAAATCTGGGGAAACGAGCCGGAAAAATTTTATCGCGTTGCCAAATTCCTGACATCGCTGAACCTGTTCGATGGGGTTGACATCAATATGGGATGCCCGGTAAAAAAGGTGGTCAAGAAAAATACCTGTTCGGCACTCATCCAATTTCCTGATTTGGCTAAAGAGATTATTTCGGCCACCAAAGAGGGTTCCGGGCTTCCGGTTTCGGTGAAAACACGGATCGGGTTTAACACCATTGCTACAGAATCATGGATTTCGCACCTGCTCACT
PROTEIN sequence
Length: 173
MNFWQTSRTPFFILAPMEDVTDTVFREVVLSVSDPSVLNVLFTEFTSVDGLLDERGHESVAQRLKVSASEQQLLRDRDTKLVAQIWGNEPEKFYRVAKFLTSLNLFDGVDINMGCPVKKVVKKNTCSALIQFPDLAKEIISATKEGSGLPVSVKTRIGFNTIATESWISHLLT