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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_357_16

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: comp(13510..14559)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 349.0
  • Bit_score: 713
  • Evalue 1.40e-202
ribosomal large subunit pseudouridine synthase D id=4892358 bin=GWC2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 350.0
  • Bit_score: 713
  • Evalue 1.00e-202
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 348.0
  • Bit_score: 503
  • Evalue 3.50e-140

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Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1050
ATGATAGACGGAGTGCAGGAGAATTTTGAGGAGCAGGAAGAAAACAGTGAATTGTTTGAGCATTTTAGGTTTGTTGCCGATAAAGGGCAAGGATTATTACGGATTGATAAATTTCTGCAAATCCGGGTGGAGAATGCCTCCCGTTCTAAAATACAGGCTGCCGCAGAGAATGGCTCCATTTTGGTGAACGATAAACCGGTAAAGGCCAATTACCGTGTAAAACCAGGTGATGTTATTTCAGTGGTTTTGGAATACCCACCCCGTGAAATTGAAATTATCCCCGAAGATATTTCCATTGAAGTTATTTATGAAGACGATTACTTAGTGGTGGTAAACAAGCCTGCCGGTTTGGTAGTGCATCCCAGCTATGGGCATTATACAGGTACGTTAATCAATGCCTTGGCATACAGATACAAGGATTTACCTATTTTTAATGGTAGCGATGCCCGTCCGGGCTTAATCCACCGGATTGATAAAGACACATCGGGTTTATTAGTTATTGCCAAAACCGAAGCCGCCAAAACCCACATTGCCCTTCAATTTTTTGAGCATACTACCCACCGCAGGTATGTAGCTTTGGTCTGGGGAAGTTTCGATGAAGAAGAGGGAACCATCACCGGGCACGTTGGGCGGAGCCTTAAAAACCGGAAAGTGATGGACGTTTTTCCCGATGGAGAATACGGAAAACATGCCATAACTCATTACAAAGTCTTGGAACGTTTGGGTTATATAACTTTAATAGAGTGTAGGTTAGAAACCGGCAGAACGCACCAGATAAGGGCGCATATGAAATATTTGGGGCACCCCCTGTTTAACGATCCGGAATATGGAGGCGACCAGATTTTAAAAGGAACCACCTTTACCAAATACAAACAATTCGTGCAAAACTGTTTTGCCTTGTTGCCACGCCAGGCTTTGCATGCCAAAGAACTGGGGTTCCGTCACCCAAAAACCAACCAATTTGTTCAGTTCGATTCACCCATTCCCGATGACATGACTTCGGTGATTAACAAATGGCGGAATTACATTTCAGACAGAAACAACCAATAG
PROTEIN sequence
Length: 350
MIDGVQENFEEQEENSELFEHFRFVADKGQGLLRIDKFLQIRVENASRSKIQAAAENGSILVNDKPVKANYRVKPGDVISVVLEYPPREIEIIPEDISIEVIYEDDYLVVVNKPAGLVVHPSYGHYTGTLINALAYRYKDLPIFNGSDARPGLIHRIDKDTSGLLVIAKTEAAKTHIALQFFEHTTHRRYVALVWGSFDEEEGTITGHVGRSLKNRKVMDVFPDGEYGKHAITHYKVLERLGYITLIECRLETGRTHQIRAHMKYLGHPLFNDPEYGGDQILKGTTFTKYKQFVQNCFALLPRQALHAKELGFRHPKTNQFVQFDSPIPDDMTSVINKWRNYISDRNNQ*