ggKbase home page
Advanced Search
Search Help

RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_187_78

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: comp(91992..95798)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
yiaD; outer membrane protein Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2509
  • Evalue 0.0
Possible outer membrane protein id=2147529 bin=GWD2_Bacteroidetes_40_43 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2509
  • Evalue 0.0
yiaD; outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 24.6
  • Coverage: 840.0
  • Bit_score: 211
  • Evalue 1.70e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3807
TTGAAAAAGTTTATCATTGCTGTAATCGTTGCTGTTAGTATATCGGTAGCTCTGAAGGGTCAGGCCTATCGGGTATTTAACATTGATGCCAGCCGGTTTCCATTGATGAAAGCCCAAATTTGGGCGGTGGACAGTAATTACAATGCCAGCCAGTTAACTCTCAAAAACATTCAGATTTCCGATAACGACGAATTAAAAACGCCCATCGAATTTAAAGCTCCCAGTTCTTCCATTTTACCGTCCTCAATCGTTTTGGTGTTGGATATTTCCGGCTCCATGGAAGGGGTAAGGTTTGATATCTTAAAACAAACCGTGGCTAATTTCCTGAAAAACCTGCCCATGGAACTTACCGAAGTTGCATTGGCCGCTTTTAGCGACAACATGTATTTGCTGTGCGATTTTACCCACGACCGGAACCGGTTGAACCAATCGTTGACAAAAATTTCTCCCGGGGGCGGAACCAGCTTCAACAATGCCTTTTTAACGGAATTTTATGGAGCCTTGGACATTTCTAAAATGGGTAAGTACAAACGGGTAGTGATTTTTTTAACCGATGGACTGAGCTCGGCTAATTATAATCTGATTGTGCAACAGGCCATCCGCGATACCATCCAGGTGAACTGCCTTACAGTTGGGCTTCCCATTAGCGATGAATTGCTGTTTATTGCCAAAGAAACCAACGGCAATTATTACAGCGACTTGAACACTCCCAACGACATTCAAACCGCGTTTGAAACCATTTACCATCAGATTCAGGAAAATACCTACGGTTACCTCACCTGGAGGGCTAACCCCAGTTGCAATCCTGAGAAGGAGACGACGATAACTTTGGGGGGACAACAGTTTCGAATTCAATATACCATTCCAGAGGAGCTGGTGGGTAGCGTGGAGGTGGCACCCTCGTCAGTCACTTTTGGTGAGGGCTCACCTCAAAAGACCCAATACAGACCTGTTTTTGTAAAAGGAAATAACATTGATTTACATATTACAAAGGTTACCAACACCAACGATTCCCTTTTTGGTTATCAAAAGTCAAGAATCCCTTTAATTACTAAGGCCAATCAATGGGAAACAGTGAACCTGACCTTTACCCCCATAGACAGCATCTTTACTTTGGCTACTTATACCATCCAAAGCAAAAACTGTCCCGATCAGGCACTTTTTGCCTCTTCCACGGGTAAAAAGAAGCTCTTGATTACAGAACCCCACGGAGGTGAGGTTTTCCCCAGAGGATTGGCTATTCCTGTTCAATGGAAAGGTATCGACCCGAGTACCCCGGTCGATCTTTATTTTCAACGGGAAGGTGAAACCAACTGGACTTATCTTTCAACGGGAGCGCACTTTCATCATGAATTAAAAGCACCTTCTTTGGATGGACAGATACGGCTTCTGGCGCAGATTACCAACAACCTTACCTTTCGAAACCTGATGAATGCTCCGGTGACTGTTTTTAGTGAACAGGGATTCAAATCGGCAGTTTTTAATGATGGGGGGACCGAAATCTTGACACAATCCGGAAGTTCGATTATCCAAACCTGGGATGCCCTGACCGGGGCAATAGTCAATAATTTTGAAAACACAAACCCTGGCGAAGTCGCTTATTTTGCCAGGTTTAATCGGGTGGTGAATGTATCAAAGAACAATATCACCTTGTTGACCAACCGGAATGGGATGTTTGTTAAAGACGTCCCATTGCCGGGAAAAAAAACCTGGACTTCCTTCGTGTTTATCAAAGGGAAAGAATTCTATACCTCAGCCATGTCTTACTCATTCACGAGGTTTTGGGATCCTACATTGAATTTTACTGTAAATGATCTGCCTGGGGGGAAGATTCTGGATGCAGCAGCTACCCCGAACACAGAGTATATTGTTGGCCGCGAAGATGACCGGTTATTGGTTGTAAAAGTAAAATCTTCTCAACGCTGGTTTTCCATCCCCATCGCAGAAGCTTTGCAAAGAACGGTGCTACACCATTCTAAAAACTATTTGGTGGTCGATCAATTTCCTACTTGCGATTTGTATGAGTTAGATTCAAAGAAGAGGATTGCCTCATGGACGAAGCAGCATTTTTTACAGTTTGAACCTTCAGGGAACCACCTGATTTTGCAGGATAGCCTCTGTACTTCCATCCATTCACTGGAATCAGGTGCGGAGGAATGGGCTTTTGGAGCTACGGATACTTTTCAGGTATCTAAAAACGGGGAGTATCTGGCCTACTATGCGCATGATTCTTTAAAAGTAGTCCAACTCAATATACAGAAAATCACCGATACCCGGAAAGTGCACCAATTAAAGCAGTTTCAGTTTTACCCCCAAAAAAATTATTTGGCATTACTGAGCAGCGATTCGTTGATGATTGTTGACTTTAAAACGGGAAAAATACTGGAAAAAGTGAAAGTGGAAAAGGATTTGGTGGTGGATATGGATGTATCGCCCACCGAAGAATCGATAGCCATTGTTACTCAAAAAATGATTGCTTTGTGGAAACCCGGAGTTCCTGTAGATAGCGACACTTCAGCCTATTTTCAGGTTGTTTCGCCCAAACCAAAAGTTCAGGGATTATTAACCTTTGAACCGCAATTTATCCATCAACAGGTTGAAAAAGTATTTAAAAAAGTGATTAACAATTCCACACCTTTCCCCATTACCGTCGATTCTCTGGTTATTGAAAAGTCAAGTACAGCATTTGAGTTGGTTTCCACCCACGGGCCTATCGTGCTGGAGCCAAAACAATCAACTTCTGTTGAAATCCGTTGCTGTCCGGATAGAGTAAGGGAGGTAAAAGGAAAATTGTTGGTTTACAGCAGCATCCATCAACAGGAAATCCTATTACAGGGATTGGGCCTGCAGCCTTCGTACGTATTGCTTAATCCGGTAGTTGATTTTGGGGAATGGAAAGTGGGAGAGGCTGCTCATGAGTTGATTCCCGTTCTGATGAACACTGGAAATACGGAACTGTTGGTTTCTCATCTTGAAATATGGCCGCAAACTACCAGTTATTCTTTAAAAAACTCCTTTGCTAAGAAAACCTTGCGCCCTAACGATACCTTGTGGGTGAAGGTGCAGTTTCAGCCGCAATACCGGGGAAGGCAATCGGGGATTTTGAAATTGAATATTGGGACTGCCGAATCGGTGTCAGTAACAGAATTGATGGGAACGGGATTGGCAAAAAGGCAATTGGTTATTTCCGGGAGAACCTTGCATGCAAAAACCTTACAACCCTTGACAGCCCAAGTTGTTTGTACCGAACTCCAGTCGAAACGGATGATATGTCAGGAAGATTCAAAGACTGATGGAACCTTTTCCTTGGTGCTGGCTACCGATTTGAATTACAGCCTTACCGCTCTGTTGACAGGCTACTTTTCATCAAGCGAGAACCTGGATTTGGTAGCAACACAAACCGCCGATTCCCTTTGGGTCCAGATATTGCTCACCCCTATCGAAACTCAATCGAGAGTGGTTCTGAACAATATCTTTTTCGAGTCTGGAAAAGCCGAACTCATGGCCATTTCGCAGAACGAACTGGATCGGTTGGTGTCGTTGCTGATATTAAATCAAGGGTTGGTGATTGAAGTTCATGGTCATACCGATTTTGTTGGAACCGGGCAGGAGAACCTGCTGTTGTCGCAGCAAAGGGCACAGACCGTGAAAAAATATATGGAAGGCAAAGGCATCCCGGCAAACCGGATTCAACTGCGGTTTTTTGGAGAAAGCCAACCGATTTCGGAAAATGAAACCGAAGAAGGGCGTAAGGCCAACCGCCGGGTAGAAATCATTTTTATAAGAAGTGGAGCAGAGAAACAATAA
PROTEIN sequence
Length: 1269
LKKFIIAVIVAVSISVALKGQAYRVFNIDASRFPLMKAQIWAVDSNYNASQLTLKNIQISDNDELKTPIEFKAPSSSILPSSIVLVLDISGSMEGVRFDILKQTVANFLKNLPMELTEVALAAFSDNMYLLCDFTHDRNRLNQSLTKISPGGGTSFNNAFLTEFYGALDISKMGKYKRVVIFLTDGLSSANYNLIVQQAIRDTIQVNCLTVGLPISDELLFIAKETNGNYYSDLNTPNDIQTAFETIYHQIQENTYGYLTWRANPSCNPEKETTITLGGQQFRIQYTIPEELVGSVEVAPSSVTFGEGSPQKTQYRPVFVKGNNIDLHITKVTNTNDSLFGYQKSRIPLITKANQWETVNLTFTPIDSIFTLATYTIQSKNCPDQALFASSTGKKKLLITEPHGGEVFPRGLAIPVQWKGIDPSTPVDLYFQREGETNWTYLSTGAHFHHELKAPSLDGQIRLLAQITNNLTFRNLMNAPVTVFSEQGFKSAVFNDGGTEILTQSGSSIIQTWDALTGAIVNNFENTNPGEVAYFARFNRVVNVSKNNITLLTNRNGMFVKDVPLPGKKTWTSFVFIKGKEFYTSAMSYSFTRFWDPTLNFTVNDLPGGKILDAAATPNTEYIVGREDDRLLVVKVKSSQRWFSIPIAEALQRTVLHHSKNYLVVDQFPTCDLYELDSKKRIASWTKQHFLQFEPSGNHLILQDSLCTSIHSLESGAEEWAFGATDTFQVSKNGEYLAYYAHDSLKVVQLNIQKITDTRKVHQLKQFQFYPQKNYLALLSSDSLMIVDFKTGKILEKVKVEKDLVVDMDVSPTEESIAIVTQKMIALWKPGVPVDSDTSAYFQVVSPKPKVQGLLTFEPQFIHQQVEKVFKKVINNSTPFPITVDSLVIEKSSTAFELVSTHGPIVLEPKQSTSVEIRCCPDRVREVKGKLLVYSSIHQQEILLQGLGLQPSYVLLNPVVDFGEWKVGEAAHELIPVLMNTGNTELLVSHLEIWPQTTSYSLKNSFAKKTLRPNDTLWVKVQFQPQYRGRQSGILKLNIGTAESVSVTELMGTGLAKRQLVISGRTLHAKTLQPLTAQVVCTELQSKRMICQEDSKTDGTFSLVLATDLNYSLTALLTGYFSSSENLDLVATQTADSLWVQILLTPIETQSRVVLNNIFFESGKAELMAISQNELDRLVSLLILNQGLVIEVHGHTDFVGTGQENLLLSQQRAQTVKKYMEGKGIPANRIQLRFFGESQPISENETEEGRKANRRVEIIFIRSGAEKQ*