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SCNpilot_expt_300_bf_scaffold_47

Search features with annotation key words

Displaying items 31-60 of 207 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_47_31
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

26421..28763
DNA (2343bp) protein (781aa)
Membrane transport protein id=2444210 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
membrane transport protein Tax=GWC2_TM7_44_17_curated
Drug exporter of the RND superfamily protein
SCNpilot_expt_300_bf_scaffold_47_32
unknown

Not on your lists

comp(28790..30145)
DNA (1356bp) protein (452aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_47_33
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(30191..31405)
DNA (1215bp) protein (405aa)
putative HtrA2 peptidase (EC:3.4.21.108) Tax=GWC2_TM7_44_17_curated
protease Do id=4358070 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
protease Do
SCNpilot_expt_300_bf_scaffold_47_34

Not on your lists

comp(31453..32760)
DNA (1308bp) protein (436aa)
Major Facilitator Superfamily {ECO:0000313|EMBL:AIA19083.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Multidrug resistance protein id=4339265 bin=GWC2_TM7_48_9 species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
major facilitator transporter
SCNpilot_expt_300_bf_scaffold_47_35
Candidatus Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(32917..33504)
DNA (588bp) protein (196aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA06872.1}; TaxID=1476577 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria oral taxon TM7x.;"
id=2442736 bin=GWC2_TM7_44_17 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
SCNpilot_expt_300_bf_scaffold_47_36
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

33718..34281
DNA (564bp) protein (188aa)
LemA-like protein id=2442733 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
LemA-like protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_47_37
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

34299..35171
DNA (873bp) protein (291aa)
htpX; membrane protease (EC:3.4.24.-) Tax=GWC2_TM7_44_17_curated
htpX; membrane protease (EC:3.4.24.-)
protease HtpX id=2442730 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
SCNpilot_expt_300_bf_scaffold_47_38
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

35155..36210
DNA (1056bp) protein (352aa)
Putative uncharacterized protein id=2442727 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
conserved membrane protein of unknown function Tax=GWC2_TM7_44_17_curated
hypothetical protein
SCNpilot_expt_300_bf_scaffold_47_39
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

36194..38218
DNA (2025bp) protein (675aa)
ligA; DNA ligase, NAD-dependent (EC:6.5.1.2) Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
DNA ligase id=3133219 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
SCNpilot_expt_300_bf_scaffold_47_40
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38275..38574
DNA (300bp) protein (100aa)
Putative membrane protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K0U3_SACES
Uncharacterized protein {ECO:0000313|EMBL:EWC62589.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongi
hypothetical protein
SCNpilot_expt_300_bf_scaffold_47_41
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(38624..38947)
DNA (324bp) protein (108aa)
RNP-1 like RNA-binding protein Tax=CG_TM7_01
RNP-1 like protein RNA-binding protein
RNP-1 like RNA-binding protein id=5225948 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
SCNpilot_expt_300_bf_scaffold_47_42
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39335..39568
DNA (234bp) protein (78aa)
Cation transport regulator n=1 Tax=Pantoea sp. Sc1 RepID=H8DMY1_9ENTR
Cation transport regulator {ECO:0000313|EMBL:KKB04952.1}; TaxID=470931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anthoph
chaB; Cation transport regulator chaB
SCNpilot_expt_300_bf_scaffold_47_43
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(39569..40597)
DNA (1029bp) protein (343aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2) Tax=CG_TM7_01
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PY42_9BACT
SCNpilot_expt_300_bf_scaffold_47_44
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

40658..41617
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RUC1_9BACT
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_47_45
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

41626..42909
DNA (1284bp) protein (428aa)
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
id=5226843 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_47_46
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

42955..44331
DNA (1377bp) protein (459aa)
hypothetical protein
id=2443985 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_47_47
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


44456..46882
DNA (2427bp) protein (809aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=813 species="Bacteria; Chlamydiae
Leucine--tRNA ligase id=2442454 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
leucine--tRNA ligase
SCNpilot_expt_300_bf_scaffold_47_48
unknown

Not on your lists

comp(46925..47383)
DNA (459bp) protein (153aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_47_49
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

47540..47689
DNA (150bp) protein (50aa)
hypothetical protein Tax=CG_TM7_01
id=2442452 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
SCNpilot_expt_300_bf_scaffold_47_50
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

47746..48207
DNA (462bp) protein (154aa)
putative transcription termination factor Tax=CG_TM7_01
N utilization substance protein B-like protein
N utilization substance protein B homolog id=5226839 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
SCNpilot_expt_300_bf_scaffold_47_51
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

48185..48682
DNA (498bp) protein (166aa)
NUDIX hydrolase id=3133427 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
NUDIX hydrolase Tax=GWC2_TM7_48_9
NUDIX hydrolase
SCNpilot_expt_300_bf_scaffold_47_52
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

48682..49386
DNA (705bp) protein (235aa)
putative ribonuclease III (EC:3.1.26.3) Tax=GWC2_TM7_44_17_curated
Ribonuclease 3 id=2442445 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Ribonuclease 3
SCNpilot_expt_300_bf_scaffold_47_53
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(49378..49704)
DNA (327bp) protein (109aa)
transmembrane_regions Tax=CG_Pacearch_01
MtN3 and saliva related transmembrane protein id=2949298 bin=GWC1_CPR2_39_9 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
SCNpilot_expt_300_bf_scaffold_47_54
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists


49874..50254
DNA (381bp) protein (127aa)
rpsP; 30S ribosomal protein S16 Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
rpsP; 30S ribosomal protein S16
rpsP; ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=5226836 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
SCNpilot_expt_300_bf_scaffold_47_55
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

50392..50793
DNA (402bp) protein (134aa)
RNA-binding protein (Contains KH domain)-like protein (Fragment) id=2442438 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_47_56
unknown

Not on your lists

comp(51057..51269)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_47_57
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

51345..52001
DNA (657bp) protein (219aa)
trmD; tRNA(m1G37)methyltransferase Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
tRNA (guanine-N(1)-)-methyltransferase id=2442427 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
tRNA (guanine-N(1)-)-methyltransferase
SCNpilot_expt_300_bf_scaffold_47_58
unknown

Not on your lists

comp(51985..52149)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_300_bf_scaffold_47_59
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

52252..52731
DNA (480bp) protein (160aa)
id=2442425 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
membrane protein of unknown function
Tax=BJP_IG2103_TM7_39_1400
SCNpilot_expt_300_bf_scaffold_47_60
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

52785..53321
DNA (537bp) protein (179aa)
id=2442424 Tax=CG_TM7_01
id=2442424 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Displaying items 31-60 of 207 in total

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