ggKbase home page

qh_3_scaffold_17854_3

Organism: QH_3_TM7_54_7

partial RP 19 / 55 BSCG 24 / 51 MC: 2 ASCG 1 / 38
Location: 927..1211

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YK66_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 89.0
  • Bit_score: 84
  • Evalue 6.30e-14
rplD; ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=ACD80 similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 89.0
  • Bit_score: 85
  • Evalue 5.20e-14
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 91.0
  • Bit_score: 77
  • Evalue 1.70e-12

Lists

This feature is not on any list.

Notes

CPR Jill Banfield (10/23/14)

Taxonomy

ACD80 → SR1 → Bacteria

Sequences

DNA sequence
Length: 285
ATGGCGACCGCGCCGACATTCACCAAGACCGGCAACGCCTCTTCGCGGAACACCGCCCTTCCGGAGACGGTGTTTTCCGTCCCCGCCGTCTCCCATGATTTGTTACACCAAGCCTACACCATCCAGTGTTCCCACCAGCATGCCCGCGGTGCCCACACCAAAACGCGCGGTGATGTACGTGCCAGCGGCCGAAAAATCAAACCCCAGAAGTATACGGGTGGCGCCCGGGCTGGTACGAGTACCTCTCCCATGCGTCGCGGCGGCGGGGTCGCGTTCGGACCCCAA
PROTEIN sequence
Length: 95
MATAPTFTKTGNASSRNTALPETVFSVPAVSHDLLHQAYTIQCSHQHARGAHTKTRGDVRASGRKIKPQKYTGGARAGTSTSPMRRGGGVAFGPQ