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A1-16-all-fractions_k255_2670356_2

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: comp(716..1594)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IV06_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 267.0
  • Bit_score: 226
  • Evalue 1.90e-56
sigma-B/F/G subfamily RNA polymerase sigma-28 factor similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 267.0
  • Bit_score: 226
  • Evalue 5.30e-57
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily {ECO:0000313|EMBL:ADP78886.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 267.0
  • Bit_score: 226
  • Evalue 2.60e-56

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 879
GTGCACGTGGACACAAGTATCCGCCGGCCCGCTGAGGGCCCGCAGGGAAGAGTGCCTGACCAGCGCCCTTCCGCCGCACCCCCCGTGGCACCTGAGGAGCTGAGCGACGACGAACTGCTGATGCGCTGCCGCGCCTACCCGCGGGACAGCGCGGAACGCGCCACGGCCTGCGAGGTGCTCGTCCGGCGCTACACGCCGCTGGTCCGCGCGTGCGCGCGTCAGTACATGGCCAGCCCGGAGCCGGCCGATGACCTGATGCAGGTGGGATTCATCGGCCTGATGAAGGCGATCAACAACTACGACCCGGCCGTGGGCAGGGAACTGCGCGCGTATGCGGTGCCCTGCATCACCGGGGAAATCAAGCGCCACTTCCGCGACAAGCGCTGGCAGGTCCGGGTGACACGCCCGGTGCAGGAACTCCTGCTTGAGCTGCGCGGCAGCACCGAAGACCTGACGCATGAGCTTGGCCGCCTGCCGACCACCGCCGAGCTTGCCGCGCGGCTCGGCGTGACCGCCGATGAGCTGAACGAGGCGCTGCAGGCCGCCAAGGGCTTCAGCGCGCTGTCGCTCGACGCCCCGGTATCCGGTGCCATGGACGATCCAGCCGAGCTCGTCGACGTGCTCGGCGTGGAGGATGACGCGTTCGCGCAGGCGGACGGCATGGAGGCCATCGCCAGCCTCTGGGGCCAGCTGCCCCGCCGTGAGCAGCGCATCCTGCTCATGCGGTACTACGGGAACCTCACGCAGGAGGAGATCGCCCGCCGGCTTGACATCTCGCAGATGCATGTGTCCCGGCTGCAGGCCCGGGCGCTCGCCCGGCTGCGTGACTGGCTCACCGACGACACTGACCCGTGCGACGTGGGGAGCGGTACCGGCTGA
PROTEIN sequence
Length: 293
VHVDTSIRRPAEGPQGRVPDQRPSAAPPVAPEELSDDELLMRCRAYPRDSAERATACEVLVRRYTPLVRACARQYMASPEPADDLMQVGFIGLMKAINNYDPAVGRELRAYAVPCITGEIKRHFRDKRWQVRVTRPVQELLLELRGSTEDLTHELGRLPTTAELAARLGVTADELNEALQAAKGFSALSLDAPVSGAMDDPAELVDVLGVEDDAFAQADGMEAIASLWGQLPRREQRILLMRYYGNLTQEEIARRLDISQMHVSRLQARALARLRDWLTDDTDPCDVGSGTG*