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A1-16-all-fractions_k255_2695948_4

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: 2275..3246

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF-subfamily sigma factor n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RIK7_FRAAA similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 286.0
  • Bit_score: 327
  • Evalue 1.50e-86
RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 286.0
  • Bit_score: 327
  • Evalue 4.10e-87
Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:CAJ62661.1}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 286.0
  • Bit_score: 327
  • Evalue 2.10e-86

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Taxonomy

Frankia alni → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 972
GTGACAGGCGTGCGCGAAGAAGGACCCGCGGAAGGATCAGGGCAGCGCCAGGCTGCGGCGGAACAAGCCCAGGCGCGGTCCGGCGATGCCCGGCTGGCTGAGCTGTTCGAGGAGCACCGCGGACGGCTGCGCGCGGTGGCCTACCGGATGCTCGGGTCGCTTGATGAAGCCGAGGACGCGGTGCAGGAATCGTGGGTCAGGTTCGCCGGGGCAGGCGTCGGCGGAGTGGAGAACCTGGGCGGCTGGCTGACCACGATCGTGACCAGGGTCTGCCTGAACGTGCTGCGCGCCAGGGCGGCGCGGCCGGAGACCCTGGCGGGCCCGTGGGTGCCCGACCCCGTGCTCAGCCCGGCGGACGGCCCGACGCCTGAGCAGGAGGCGCTGCTCGCCGACTCGGTCGGGCTCGCCATGCTGGTGGTGCTCGACACGCTGTCCCCGGCGGAGCGGGTCGCCTTCGTGCTGCACGACGTGTTCGACGTGCCGTTCGGCGAGATCGCCCCGGTGCTCGGCCGCACCCAAGAGGCGTCCAGGCAGCTGGCGAGCCGGGCACGGCAGCGGGTCAGGACCGCGGGCGCGCACCAGCCTGACGGCACGCTCGGCGCGCGGCGGGCGGTGATCGACGCCTTCTTCGCCGCGGCGCGGGCCGGCGACCTGGCCACCCTCGTGGAACTGCTCGACCCCGACGTGGTGCTCCGCACCGACGGCTTCGTCGCCGGGTCGGCGCTGCTGCGCGGCGCGGACACGGTGGCGCGGGCCACGCTCGGCGGCGCGCATCCGGAGGCGGAGTTCCGTCCCGTGGTAGTCAACGGCGCCGCCGGCGTGCTGATCACGCTGCGCGGCAGGCCCGCAGGGCTGATGGCCTTCACCGTCGTGGGCGGCAGGATCACCGCGGTCGACGGCATCACAGACCCGCACCGGCTGCGCCGCCTGGTGGCAGCCAACGGCGTCAACGGCGCAGCGGATCAGCCGTAG
PROTEIN sequence
Length: 324
VTGVREEGPAEGSGQRQAAAEQAQARSGDARLAELFEEHRGRLRAVAYRMLGSLDEAEDAVQESWVRFAGAGVGGVENLGGWLTTIVTRVCLNVLRARAARPETLAGPWVPDPVLSPADGPTPEQEALLADSVGLAMLVVLDTLSPAERVAFVLHDVFDVPFGEIAPVLGRTQEASRQLASRARQRVRTAGAHQPDGTLGARRAVIDAFFAAARAGDLATLVELLDPDVVLRTDGFVAGSALLRGADTVARATLGGAHPEAEFRPVVVNGAAGVLITLRGRPAGLMAFTVVGGRITAVDGITDPHRLRRLVAANGVNGAADQP*