ggKbase home page

A1-16-all-fractions_k255_2821210_7

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: comp(7584..8786)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1B8F3_RHOOB similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 388.0
  • Bit_score: 616
  • Evalue 1.10e-173
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 388.0
  • Bit_score: 616
  • Evalue 3.20e-174
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAH51956.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 388.0
  • Bit_score: 616
  • Evalue 1.60e-173

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
GTGCAGGACGCCTTCGTCCGGGCGGCGGAGCGATGGCCGCGCGACGGCGTTCCCGGCAACCCCGCCGGCTGGCTGCTTACCGTCGGCCGGCGTCGCGCGATCGATGCGTTCCGCCGGCGTGCCACCCTCGATAAGAAATACGCCGCCCTCGCCCGCGACCTGGGCGAGGGCGGCGCCACCTCGGGGAGCCCCGCTGCCTGCCCCGTGCGGGACGGTGCGGACTTGCTGTGGGATCCAGACCGGATCGACGACGACGTGCTCGCGCTGATGTTCATCGCCTGCCACCCGGTGCTGTCGCGGGAGGCCCGGGTGGCACTCACGCTGCGGGTGGTCGGCGGCCTGACCAGCGACGAGATCGCCAGGGCGTTCCTCGTCCCGGCCGCGACCGTCCAGGCCAGGATCACCCGGGCGAAAAAGACACTCACGGCGGCCCAGGTCCCCTTCGCTGTGCCGTCTTCAGCGGAGCGGGCGGAACGCCTTGGCTCCGTGCTCAGCGTGATCTACCTGATCTTCACCGAGGGATCCTCGGCGAGCTCGGGCGGCGACCTGATCAGGTTCGACCTCGCGGTCGAGGCGCAGCGCCTCGCCCGTGTGCTTGCCACGCTGATGCCGGACGAGCCGGAGGTGCACGGCTTGCTGGCGCTCCTTGAGCTGACCGCGGCGCGCTTTCCCGCCCGGACAGGTCCTGACGGCGAGCCCGTGCTGCTCGACAAGCAGGACCGCGTTCGCTGGGACCACGCCGCGATCCGCCGGGGCCGAGCCGCCTTGGCCCGTGCTGAGCAGGCAGGCCGCGGCCTTGGGGCGTACGGGCTGCAGGCGGCGATCGCGGAATGCCATGCCGTCGCCCCATCGGTCAGCGCGACCGACTGGGAGCGCATCGTGATCCTCTATGAGGCGCTCGGCCGGCTCGCGCCGTCGCCAGTTGTCGACCTCAACCGGGCGGTCGCGGTCGCCATGCACCAAGGGCCTGCCGCGGCGCTCCGCATCGTGGACGAACTGCTGGCCGCCGGCGCGCTGCCCGGGTCGCACCTGCTGCCGAGCGTGCGCGGGGAACTGCTCATGCGCATCGGCCGCAACGACGAGGCGCGCGCCGAGTTGGAGCGCGCCTCGTCGTTGTGCCGCAATGAGCGGGAGCGTGAGGTGCTACGACGCAAGATCACCGAGATCGGGGATCACGGGCGAATGGACACGAAGAACGGTTGA
PROTEIN sequence
Length: 401
VQDAFVRAAERWPRDGVPGNPAGWLLTVGRRRAIDAFRRRATLDKKYAALARDLGEGGATSGSPAACPVRDGADLLWDPDRIDDDVLALMFIACHPVLSREARVALTLRVVGGLTSDEIARAFLVPAATVQARITRAKKTLTAAQVPFAVPSSAERAERLGSVLSVIYLIFTEGSSASSGGDLIRFDLAVEAQRLARVLATLMPDEPEVHGLLALLELTAARFPARTGPDGEPVLLDKQDRVRWDHAAIRRGRAALARAEQAGRGLGAYGLQAAIAECHAVAPSVSATDWERIVILYEALGRLAPSPVVDLNRAVAVAMHQGPAAALRIVDELLAAGALPGSHLLPSVRGELLMRIGRNDEARAELERASSLCRNEREREVLRRKITEIGDHGRMDTKNG*