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A1-16-all-fractions_k255_3172022_1

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: comp(1..342)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Actinopolymorpha alba RepID=UPI00037CF771 similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 114.0
  • Bit_score: 209
  • Evalue 1.60e-51
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFC82167.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 114.0
  • Bit_score: 201
  • Evalue 6.00e-49
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 114.0
  • Bit_score: 188
  • Evalue 1.10e-45

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Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 342
GTGCACGAGCTGCTGCTGCGGGAACTCGTCCCCCCGGTGATCGGCGTCCTCGTCCGGCGCGGAGCGGACTTCGCGTCGGCCGAGGACGCCGTCCAGGAGGCCCTGATCCGCGCGCTTGACAGCTGGCCGGACGATCCGCCGCGTGATCCGAAGGCGTGGCTGGTCGCGGTCGCCTGGCGCAAGTTCCTCGACACCGCCCGCGCCGAGGCGTCGCGGCGGGGCAGGGAACTGGCCGTAGACGCCGAGCCGGCGGCCGGCCCGGTGCCCGCCACCGACGACACGCTGCGGCTCTACTTCCTGTGCGCGCACCCCTCCCTGCCGCAGGCCTCGGCCGTCGCCTTG
PROTEIN sequence
Length: 114
VHELLLRELVPPVIGVLVRRGADFASAEDAVQEALIRALDSWPDDPPRDPKAWLVAVAWRKFLDTARAEASRRGRELAVDAEPAAGPVPATDDTLRLYFLCAHPSLPQASAVAL