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A1-16-all-fractions_k255_3385115_1

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: comp(3..836)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2ZF20_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 280.0
  • Bit_score: 315
  • Evalue 2.90e-83
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:ETK35385.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 279.0
  • Bit_score: 317
  • Evalue 1.40e-83
RNA polymerase sigma factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 278.0
  • Bit_score: 302
  • Evalue 1.20e-79

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 834
GTGCAGGAGGCATGCGCGGCGGCCGTGGCACAGTGGCCGCGTGACGGGCTGCCGGCTAACCCAGGCGGCTGGCTCGTCGCGGTCGCGCGGCGGCGTGCGCTTGACCAGCTGCGTCGCGAGAGCGTCCGGGCCGGCAAGGAGCGCACAGCCGTGCGGCAGTGGGCCACGGCCGAGCCGGACGGCAGCACCGTCGCCGGCGATGACGAGCTGGCGCTGCTGTTCGCATGCTGTCACCCGGCGCTTGACCCGGCCGCGCGGGTGACGCTCACCCTGCGAGTGGTGTGCGGGCTGCCGACGGCATCGATCGCGCGGTTGCTGCTGCAGACAGAGCCGGCCGTCGCCCAGCGGATCGTGCGGGCCAAGCGGAAGATCCGCGACGCGGGTATCCGGTTGGGCGTTCCCGGGCCGGACGAACTGCCGGCCCGTCTTGCGTCGGTGCTGCATGCCATCTACCTCACGTTCACGGAGGGGCACTCGCCGCGCGGCACGGGTGCTGTCGTCCGCGAGGACCTGTGCGAGGAGGCGCTGCGGCTTGCCAGGTCCCTGCGCCTGCTCTTGCCCGATGAACCCGAGGTCGATGGGCTGCTGGCGCTCATCCTGCTCACCAGCGCCCGCAATAGCGCGCGGGCGGCCGAAGACGGCGCGCTGGTGCTGCTCGCTGACCAGGACCGCCGTCAGTGGGACGCGAGCCGCCTGTCCGAGGGACGGGTGCTGGTCGAGACGGCGCTCGCCAAGCACCGTCCTGGCCGCTACCAGCTGCAGGCCGCCATCGCCGCCTGCCACGGCGACGCGGCGACAGCCGCCGACACCGACTGGCGGCAGATCGCCGCACTG
PROTEIN sequence
Length: 278
VQEACAAAVAQWPRDGLPANPGGWLVAVARRRALDQLRRESVRAGKERTAVRQWATAEPDGSTVAGDDELALLFACCHPALDPAARVTLTLRVVCGLPTASIARLLLQTEPAVAQRIVRAKRKIRDAGIRLGVPGPDELPARLASVLHAIYLTFTEGHSPRGTGAVVREDLCEEALRLARSLRLLLPDEPEVDGLLALILLTSARNSARAAEDGALVLLADQDRRQWDASRLSEGRVLVETALAKHRPGRYQLQAAIAACHGDAATAADTDWRQIAAL