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A1-16-all-fractions_k255_931938_6

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: 6672..8054

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N1R5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 471.0
  • Bit_score: 615
  • Evalue 2.20e-173
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 459.0
  • Bit_score: 604
  • Evalue 1.50e-170
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 459.0
  • Bit_score: 604
  • Evalue 7.30e-170

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Taxonomy

Thermomonospora curvata → Thermomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1383
ATGCCGCGGATCGCAACTGCCGCCTCGGCTGACGAGGAGGCGAGCTCGTCGCGTGTGGACGACCTGATCCAGCGCGGTCGCAGCCAGGGCCACCTGTCCCTTTCGGACCTGCGGACGGCGTTCGAGCAGGCCGGGCTGACGCCCGGTGAGGCCCGGTCACTGCTGCGGGAGCTGAGCGAAGCCGGCGTGCGGCTTGCCGACGAGGAGACCGAGCTCAAGGCGGCCGCCCGCGGCAAGACCAAGGCCACGGGCATCGCGAAGGCGACAACCGCCAAGGCCACGGCCGAGCCCGCCGCCCGCAAGACGCGCGCCAAGAAGGGCACGGAGGCGGCGCCCGCCCCTGTCCCGGCTAGCACTGCCGCGCAGGCGGCCGACGGCGACGCCGACGGGGAGTTCGACGGCGACGACGCCGCCACGATCGAGGCGGATGTCGCCGCGTTCGCCGACGCGGTGGACCTGGACGACCAGACGCCCGCCATGGGCGACTCGGTGCACACCTACCTCAAGTCGATCGGCCGGACCAGCCTGCTCACCGCCGAGCAGGAGGTCGACCTGGCCAAGCGGATCGAGGCCGGACTGTTCGCCGAGCACAAGCTGGACAGCGAGCCTAACCTGTCGCCCGAGTTCCGGCACGACCTGGAGCTGGTGGCCGAGGACGGCCGACGCGCCAAGGCGCACATGCTCGAGGCCAACCTGCGCCTGGTGGTGTCGGTCGCGAAGAAGTACAGCGACCGCGGGCTTTCCCTTCTTGACGTCGTGCAGGAGGGAAACCTTGGCCTGATCCGCGCGGTCGAGAAGTTCGACTACACCAAGGGCTACAAGTTCTCCACCTACGCGATGTGGTGGATCAGGCAGGCCATCCAGCGCGGGTTCGCTGACTCCGCGCGGACCATCCGGCTGCCCGTGCACGTGCTGGAGATGCTGTCCAAGCTGTCGCGCGTCGAGCGTGACATGCACCAGCGTCTCGGCCGCGAGCCCACGCCTGAGGAACTGGCCGTCGAGCTTGACCGGACCCCGGACCAGATCGAGGAGCTGCTGCGCACCTCGCGGCAGCCGATCTCGCTCGACTCCACGATCGGCGAGGACGGCGAGACGTCGATCGGCGACCTCATCGAGGACGTCGACGCGCCCGAGGCCTCAGAGCTCGTGGACCGGCAGCTCATGGCCGAGCAGCTGCGGTCGGCCCTCGACGCGCTCACCCCGCGCGAGGCGACGATCATGGCGATGCGGTTCGGGCTGTACGACGGCAACCCGCACACGCTCGACGAGATCGGCCGTGCGCTGGGGCTGACCAGGGAGCGGATCCGCCAGCTGGAGAAGCAGTCGCTGTCCAAGCTGCGGCACCCGTCGCGGGCGCAGCCGCTGCTCGACTTCGCGTCCTGA
PROTEIN sequence
Length: 461
MPRIATAASADEEASSSRVDDLIQRGRSQGHLSLSDLRTAFEQAGLTPGEARSLLRELSEAGVRLADEETELKAAARGKTKATGIAKATTAKATAEPAARKTRAKKGTEAAPAPVPASTAAQAADGDADGEFDGDDAATIEADVAAFADAVDLDDQTPAMGDSVHTYLKSIGRTSLLTAEQEVDLAKRIEAGLFAEHKLDSEPNLSPEFRHDLELVAEDGRRAKAHMLEANLRLVVSVAKKYSDRGLSLLDVVQEGNLGLIRAVEKFDYTKGYKFSTYAMWWIRQAIQRGFADSARTIRLPVHVLEMLSKLSRVERDMHQRLGREPTPEELAVELDRTPDQIEELLRTSRQPISLDSTIGEDGETSIGDLIEDVDAPEASELVDRQLMAEQLRSALDALTPREATIMAMRFGLYDGNPHTLDEIGRALGLTRERIRQLEKQSLSKLRHPSRAQPLLDFAS*