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A1-16-all-fractions_k255_1676719_9

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: comp(8188..12066)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
RNA helicase n=1 Tax=Actinomadura atramentaria RepID=UPI000378F2B1 similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 1308.0
  • Bit_score: 1497
  • Evalue 0.0
RNA helicase {ECO:0000313|EMBL:ETK32317.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 1290.0
  • Bit_score: 1502
  • Evalue 0.0
ATP-dependent RNA helicase HrpA similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 1287.0
  • Bit_score: 1471
  • Evalue 0.0

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3879
GTGAACAGTCCTTCCGCACGAGTCAAGCAGCGCGCCGCCACCCGCGAAGCCGCGCTGTCCGGCGTCTCCATCGGCTACCCGCAAGAGCTCCCGGTCAGCCAGCGCAAGGACGACATCGCCGCCGCGATCTCCGATCACCAGGTGGTGATCGTGGCCGGCGAGACCGGCTCCGGCAAGACCACCCAGATACCCAAGATCTGCCTGGAGCTCGGCCGCGGCGTCACCGGCCAGATCGGCCACACCCAGCCGCGGCGGATCGCCGCCCGCACGGTCGCCGAACGGATCGCCGAAGAACTCGGCACCCAGCTTGGCGACGTGGTCGGATACAAGGTCAGGTTCACCGACCGCTCCGGCGACGCGACCGCGGTCAAGCTGATGACCGACGGCATCCTGCTCGCCGAGATCGGCACCGACCGCAACCTCACCAGGTACGACACGCTGATCATCGACGAGGCGCACGAGCGCAGCCTCAACATCGACTTCATACTCGGCTACCTGCGCCAGCTGCTGCCCCGCCGCCCGGACCTCAAGGTCATCATCACCTCAGCGACGATCGACCCCGAGCGGTTCGCCGAGCACTTCACGGACACGCGGACCGGGCAGCCAGCGCCCATCATCGAAGTCTCCGGGCGCACCTACCCCGTGGAGGTCCGGTACCGGCCCATCGGCGACCCGGACAGGGACGAGGACCGGGACCAGGTCACCGCCATCACCGACGCGATCGGCGAGCTGGAGCGCGACGGCCCCGGCGACATCCTGGTCTTCCTCTCCGGCGAGCAGGAGATCCGCGACACCGCAGACGCGCTGAAGGGCCGCGCGAACACCGACGTGCTGCCGCTGTACTCCCGGCTGTCGTCCGCCGAGCAGCACCGGGTGTTCGAGGTGCCGGCCAGCCGCACCATGGCCAGCCGCCGCGTGGTGCTCGCCACCAACGTCGCCGAGACCTCGCTGACCGTTCCCGGCATCCGCTACGTCATCGACCCGGGCACCGCCCGGATCAGCCGCTACAGCCTGCGCACCAAGGTGCAGCGGCTGCCCATCGAGGCGATCTCCCAAGCCAGCGCCAACCAGCGCAAGGGCCGCTGCGGCCGGGTCGCCGACGGCATCTGCATCAGGCTGTACTCGGAAGAAGACTTCGAGTCCAGGCCCGAGTTCACCGACCCGGAGATCCAGCGCACCAACCTGGCCAGCGTCATCCTGCAGATGGCCGCGGCCAGGCTCGGCGACGTCCGCGCCTTCCCGTTCGTTGACCCGCCGGACCCGCGCGCCATCACCGACGGCGTGAAGCTGCTCGAGGAGCTCAACGCCGTCGCCGACGGCAAGCTCACCGAGACCGGCCGCCAGATGGCCCGGCTGCCCGTCGACCCGCGCATCGCCCGGATGATCATCGAGTCAGACAAGCAGGGCTGCGCCCGCGAGATCCTCGTCATCGCCGCCGCGCTGTCCATCCAGGACCCGCGCGAGCGCCCGTCCGACAACCAGCAGGCCGCCGACACCGCGCACCGCCGCTTCGCGCAGCCGGAGTCCGACTTCCTCGCCTACCTCGCCCTGTGGGACTACCTCGCCGAGCAGCAGCGCGAGCTGTCCGGGTCCGCATTCCGCCGCCTGTGCCGCGCCGAGTTCCTCAACTACCTGCGGGTCCGCGAATGGCAAGACCTGCACGGCCAGCTCTCCGCGCTGTCGCGTGAGCTCGGACTCAACACCAGGACATCATCAACGGAACGGGTGCGTGTACACACCGCCCTGCTCGCCGGCCTGCTCTCCCAGGTCGGCATGAAGATGCTGCTCACGCCTGCCCGGCCACCCGGCACCCGGCCAGGTGCCGCCGCCCCGGCGGAACGCGCCAGTGAAAGAGGCAGGCGCCCGCTGCCCGAATACCTCGGCGCCCGCGGCACCAAGTTCGCCGTGTTCCCCGGCTCCGGGCTCGCCCGCAAGCCGCCGGACTGGCTGATCGCCGCCGAACTGGTGGAAACCTCCCGGCTCTGGGCGCGGACCGTCGCCGCGATCGAACCGGAATGGGTCGAGCCGGTCGCCGCGCACCTGGTCAAGCGCTCCTACAGCGAGCCCCGCTGGTCCCGGTCGTCAGGCAGCGCGGTGGCAACGGAGAAGGTCACCCTGTACGGCATCCCGATCGTCGCCGACAGGACCGTGCTGCTGCACCGCATCGACCCGGTGCTCGCCCGCGAACTGTTCATCAGGCACGCGCTCGTCGAGGGCGACTGGCAGACCAGGCACCACTTCTTCCGCGACAACACCGCGCTCACCGAGCAGGCCGCCGCGCTCGAGCAGCGCGCACGCCGCCGCGGCCTCGTCGCAGGAGAGGACGCGCTCTACGCCTACTACGACGCGCGGGTACCCGCCGACGTGGTCTCCGCCCGCCACTTCGACACCTGGTGGAAGAAGCAGCGGCACCAGACACCAGACCTGCTCACCCTCTCACTCGACGACCTGCTGTCCGATGCCGCGGACGAACTCGACGCCGGCGACTACCCCGAGGTGTGGACGTCTTCCTCGGCCGGACCCGGCGGCGGCGGGCTGACCCTCTCCTATGAGTTCCAGCCGGGCAGCGACGCCGACGGCGTCACCATCGACATCCCGCTCAAGACGCTCAACCAGGCCCGCCCAGAAGAATTCTCCTGGCAGGTCCCCGGGCTACGGCTCGAACTGGTCACCGAGCTGGTCCGGTCGCTGCCCAAGAACCTGCGCCGCGAACTGGTACCCGCGCCCAACATCGCACGCGAGATCCTCGCCAAGCTTGACGGCCCCACCTCCGACGGCCCCACCTCCGACAGCACAGTCCCCGACGGCGACATCAGGGACGTCATGTCCCGCGAGCTGCTGCGGCTGCGCGGCGTCCAGGTACCGCCCGACGCGTTCGACCTGGACAGGCTCCCGCCGCACCTGCGGCTCAACTTCCGCGTGGTCGACGGGGACAAGGTCATCGCCGCGGGCAAGGACCTCGCCGCACTCCAGCGCCAGCTGCGGCCCAAGGTCCGCGCCACGCTGTCCGCCCGCGCCACCGCCATCACCAGAACCGCGGTCACCGCCTGGAACTTCGGGCCGCTGCCGAAGGTCTTCACCGACGGCGAGGTCAAGGCCTACCCCGCCCTCGTCGACGCCGGCAGCGCCGTCGACATCCGGCTGTTCGAAAGCCCGGCCGCCGCGGCGCGCGCGATGCGGGCCGGCACCAGGCGGCTTGTCCTGCTCGCCGTCAAGTCACCGGCCAACGAAGTCGCCAAGCGGCTGACCACCGCGCAGAAGCTGGTCCTTTCCGACAACCCGCACGGCTCCGTCGCCGCCCTGTTCACCGACTGCGTCAGCTGCGCCGTCGACGGCCTCATCGCCGAGGCGGACGGCCCCGCCTGGGACGCCGCCGCCTTCACCAAGATCACCGAGCACGTCAGGCCACGGCTGCACGCCACCACCTACGAGGTCGTCACCTGGGCGGAAGAGATCCTGCGCGGCGCGCACGAGGCACGCATGCGCCTGGACGCGCTGCGCAGCCCCGCACTCGCCCCGGCCGCCGCCGACATCCGCGCGCAGCTCGACGGCCTCATCGCACCCGGCTTCTTCACCGCGGCGGGCAGCGCGCGACTGCCCGCGCTCACCCGCTACATCACGGCGATCGGCAAGCGGCTCGACAAGCTGGGCGACAACGCGGGCCGCGACGCGCAGCAGATGGCCGTCATCCACCGGGTACAAGGCGATTACACCGCCGCGCTCGCGCTGCTGCCCCCCGAGGCAAGGGCGGCCGACGCCGCCAGGGAGATCCGCTGGCAGATCGAGGAACTGCGCGTCAGCCTGTTCGCCCAGACCATCGGCACCCCGGTCCCCGTCTCGGAACGCCGCATCCTGACCGCCATCGCCAACCTGGCCTGA
PROTEIN sequence
Length: 1293
VNSPSARVKQRAATREAALSGVSIGYPQELPVSQRKDDIAAAISDHQVVIVAGETGSGKTTQIPKICLELGRGVTGQIGHTQPRRIAARTVAERIAEELGTQLGDVVGYKVRFTDRSGDATAVKLMTDGILLAEIGTDRNLTRYDTLIIDEAHERSLNIDFILGYLRQLLPRRPDLKVIITSATIDPERFAEHFTDTRTGQPAPIIEVSGRTYPVEVRYRPIGDPDRDEDRDQVTAITDAIGELERDGPGDILVFLSGEQEIRDTADALKGRANTDVLPLYSRLSSAEQHRVFEVPASRTMASRRVVLATNVAETSLTVPGIRYVIDPGTARISRYSLRTKVQRLPIEAISQASANQRKGRCGRVADGICIRLYSEEDFESRPEFTDPEIQRTNLASVILQMAAARLGDVRAFPFVDPPDPRAITDGVKLLEELNAVADGKLTETGRQMARLPVDPRIARMIIESDKQGCAREILVIAAALSIQDPRERPSDNQQAADTAHRRFAQPESDFLAYLALWDYLAEQQRELSGSAFRRLCRAEFLNYLRVREWQDLHGQLSALSRELGLNTRTSSTERVRVHTALLAGLLSQVGMKMLLTPARPPGTRPGAAAPAERASERGRRPLPEYLGARGTKFAVFPGSGLARKPPDWLIAAELVETSRLWARTVAAIEPEWVEPVAAHLVKRSYSEPRWSRSSGSAVATEKVTLYGIPIVADRTVLLHRIDPVLARELFIRHALVEGDWQTRHHFFRDNTALTEQAAALEQRARRRGLVAGEDALYAYYDARVPADVVSARHFDTWWKKQRHQTPDLLTLSLDDLLSDAADELDAGDYPEVWTSSSAGPGGGGLTLSYEFQPGSDADGVTIDIPLKTLNQARPEEFSWQVPGLRLELVTELVRSLPKNLRRELVPAPNIAREILAKLDGPTSDGPTSDSTVPDGDIRDVMSRELLRLRGVQVPPDAFDLDRLPPHLRLNFRVVDGDKVIAAGKDLAALQRQLRPKVRATLSARATAITRTAVTAWNFGPLPKVFTDGEVKAYPALVDAGSAVDIRLFESPAAAARAMRAGTRRLVLLAVKSPANEVAKRLTTAQKLVLSDNPHGSVAALFTDCVSCAVDGLIAEADGPAWDAAAFTKITEHVRPRLHATTYEVVTWAEEILRGAHEARMRLDALRSPALAPAAADIRAQLDGLIAPGFFTAAGSARLPALTRYITAIGKRLDKLGDNAGRDAQQMAVIHRVQGDYTAALALLPPEARAADAAREIRWQIEELRVSLFAQTIGTPVPVSERRILTAIANLA*