ggKbase home page

A1-16-all-fractions_k255_4542861_2

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: comp(400..1611)

Top 3 Functional Annotations

Value Algorithm Source
Histone deacetylase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B2T2_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 386.0
  • Bit_score: 507
  • Evalue 9.90e-141
histone deacetylase similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 386.0
  • Bit_score: 507
  • Evalue 2.80e-141
Histone deacetylase {ECO:0000313|EMBL:ACZ83559.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 386.0
  • Bit_score: 507
  • Evalue 1.40e-140

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptosporangium roseum → Streptosporangium → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
GTGACGGTGCTGGCGACCAATGTGGAGGCGCGCGTGACTGGTCCTGCGGCGGTCGTGTGGGATGACGGGCTCACGCGCTACGACTTCGGGCCTGGCCATCCGTTCGACCCGGTGCGCGTCCGGCTCACGATGGAGCTGGCCAGGTCGCTCGGTGTGCTCGCCGGCGACTCTGTGACCATGCTCACGCCGTCGCCGGCCACCGACGGCGAACTGGAGACGGTGCACGACGGCGAGTACGTCGAGGCGGTGCGCCACGCCGGGCGCTCCCTGCTGCCGAACCTCAGGTACGGGCTCGGCACGGAAGACGATCCGGTCTTCGAGGGCATGCACGAGGCGGCCGCCCTGGTGGTAGGGGCGACCATGGAGGCGGCACGGGCGGTCTGGTCGGGCGCCGCGCGGCACGCGGTGAACGTCGCGGGCGGTCACCATCACGCGATGCGCGGAGCCGCCAGCGGATTCTGCGTATACAACGACCTCGCCGTGGCGATCAGGCAGCTGCTCGCGGCCGGGGCCGAACGGGTGGCGTACGTCGATCTCGACGTGCACCACGGAGACGGCGTGCAGGCCGCGTTCTACGACGATCCGCGCGTGCTGACCATCAGCCTGCATGAGCATCCGGCCACGCTGTTTTTCCCCGGCACGGGGCTGCCGGGTGAAACAGGTGCGGGCGCCGGGGAGGGCTATGCCGTCAACGTGGCGCTGCCCGCGGGCACCGGGGACGCCGCGTGGCTGCGCGCACTCGACGCGGTGGCGGTGCCGCTGCTTCGCTCCTTCAAGCCGGCGGTGCTGGTCAGCCAGCACGGCTGTGACAGCCACCGGCTCGACCCGCTTGCGCACCTGGCGCTGAGCGTCGACGGGCAGCGGCGTGCACAGCTGATGATGCACGAACTGGCGCACGAGCTGTGCGACGGACGCTGGATCGCCACCGGGGGCGGCGGATACGCGCTGGTTCAGGTGGTGCCGAGGACCTGGACGCACCTGCTGGCCATCGCGGCGGGCACGCCGCTCGACCCGGAAATGCCGGCTCCGGCGGCCTGGCGGGAACTCGCCCTGGCCATGACGGGCGAAACGGCGCCGCTGACGATGACCGACGGCGCTTCCGCTGAGTTTGTTTCTTTCGCATCAGGGATGGACCCGGGTGATCCGGTGGACCGTGCCATCATCCGCACGAGGAGTGCGGTGTTTCCATCGCACGGGCTGTCCGCGCTGTAA
PROTEIN sequence
Length: 404
VTVLATNVEARVTGPAAVVWDDGLTRYDFGPGHPFDPVRVRLTMELARSLGVLAGDSVTMLTPSPATDGELETVHDGEYVEAVRHAGRSLLPNLRYGLGTEDDPVFEGMHEAAALVVGATMEAARAVWSGAARHAVNVAGGHHHAMRGAASGFCVYNDLAVAIRQLLAAGAERVAYVDLDVHHGDGVQAAFYDDPRVLTISLHEHPATLFFPGTGLPGETGAGAGEGYAVNVALPAGTGDAAWLRALDAVAVPLLRSFKPAVLVSQHGCDSHRLDPLAHLALSVDGQRRAQLMMHELAHELCDGRWIATGGGGYALVQVVPRTWTHLLAIAAGTPLDPEMPAPAAWRELALAMTGETAPLTMTDGASAEFVSFASGMDPGDPVDRAIIRTRSAVFPSHGLSAL*