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A1-16-all-fractions_k255_89474_7

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: comp(5060..5563)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q242_CATAD similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 184.0
  • Bit_score: 158
  • Evalue 4.70e-36
RNA polymerase sigma24 factor {ECO:0000313|EMBL:ETK34949.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 166.0
  • Bit_score: 169
  • Evalue 2.20e-39
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 184.0
  • Bit_score: 158
  • Evalue 1.30e-36

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGGGTCAGAGTCAGCTGGAGTTCGAGGCGTTCTACGCCGCCGCCAAGGATGACTGCCTGCGCACGGTCTTCGCGTGTACCGGGGACCTGCACCGGGCCGAGGATCTGGTCGCTGAGGCATTCGCCAGGGCATGGGCGTCGTGGGGCCGGGTCGCACAGCATCCGGCGCCGCGAGCCTGGATCGTGCGCACCGCACTAAACCATGGCGTTTCCGTGTGGCGGCGGCGACGCCGAGAACTGCCGCTGGCAGACCTGACCGGCTGGGAGCCGGCCGCCGATGCCGCGCAACAGGGGATCGAGTGGGACCTGAACGCGGCGGTGCTGGCACTTCCACCACGGCAACGGCAAGTTGTGGCACTGCGCGTCTTCCTCGATCTGGACACCGCGACGACGGCACGGGCCCTCGGGATCGCCCAGGGGACCGTCCGTGCGCTGCTTTCCCAGGCCATGGCTGCCTTGCGAACCGCAATCGACACCCCGGGACAAAGGGAGAGATCACGATGA
PROTEIN sequence
Length: 168
MGQSQLEFEAFYAAAKDDCLRTVFACTGDLHRAEDLVAEAFARAWASWGRVAQHPAPRAWIVRTALNHGVSVWRRRRRELPLADLTGWEPAADAAQQGIEWDLNAAVLALPPRQRQVVALRVFLDLDTATTARALGIAQGTVRALLSQAMAALRTAIDTPGQRERSR*