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A1-16-all-fractions_k255_265660_4

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: comp(2899..3480)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X6M2_STRVR similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 189.0
  • Bit_score: 248
  • Evalue 5.20e-63
RNA polymerase {ECO:0000313|EMBL:EFL31911.1}; TaxID=591159 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 189.0
  • Bit_score: 248
  • Evalue 7.20e-63
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 184.0
  • Bit_score: 238
  • Evalue 1.50e-60

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Taxonomy

Streptomyces viridochromogenes → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGGGCATCATGAGCACAGCAGGCGACAGGCAGTCCGATGAGGCACTGCTCGCCGGACTCGGGGCGGGGGATGCCGAGCTGGCGGTGGCGTTCGTGCGCCGGTTCCAGCGGATCGTCTTCGGCGTGGCCCTCGCCGTCACCGGCGACCCGGCCACCGCCGAGGACGTCGCGCAGCACGCCTTCGAGCAGGCGTGGCGGCACGCGACCGTGTACGACTCCCGCCGCGGTTCCGTGCGGACCTGGCTGACCACGATCGCGCACAATCTGGCGATCGACGTGGTCCGTGCCCGCTCTGCGGTGCCGATGGACCCCGGCGATCTGCCGGTACTGCTCGCCGCGATGACCGAGAGCCCGGAGCGGATGGCGGTCGCCAACGACAGCGCGGAGGGAGTGCGGCGGGCCCTCACCCGGCTGCCCCTGCCCCAGGCGCGCGCGGTGGCCATGGCGGGGATATATGGCATGACAGCACGACAAGTCGCTGATACTGAGGGAATTCCGCTCGGCACGGCGAAGACGCGGATTCGGGACGGCATGCAGAAACTGAGGGTGGCCTTCCTCCCGGAGGAGGCGGGAGATGAGTGA
PROTEIN sequence
Length: 194
MGIMSTAGDRQSDEALLAGLGAGDAELAVAFVRRFQRIVFGVALAVTGDPATAEDVAQHAFEQAWRHATVYDSRRGSVRTWLTTIAHNLAIDVVRARSAVPMDPGDLPVLLAAMTESPERMAVANDSAEGVRRALTRLPLPQARAVAMAGIYGMTARQVADTEGIPLGTAKTRIRDGMQKLRVAFLPEEAGDE*