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A1-16-all-fractions_k255_348307_2

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: comp(966..1511)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BWG2_XYLCX similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 181.0
  • Bit_score: 236
  • Evalue 1.10e-59
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 181.0
  • Bit_score: 236
  • Evalue 3.20e-60
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 181.0
  • Bit_score: 236
  • Evalue 1.60e-59

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Taxonomy

Xylanimonas cellulosilytica → Xylanimonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 546
GACGACAGTCGCATCCGGTTCGAGCGCGACGTCGTGCCGCAGCTCAGTCAGTTGTACCCGGCGGCACTGCGGATGACGCGCAACCCCACTGACGCCGAGGACTTGGTCCAGGAGACGTCGGCGAAGGCGTACGCGGCATTCCACCAGTTCCGTCCCGGCACCAACCTGCGTGCCTGGCTCAACCGCATCCTCACCACGACGTTCATCAACGTGTACCGCAAACGGCGCCGCGAGCCGCAGCAGGCGCTCGGCGGCGACCTGCAAGAGTGGCAGATGTCCGCCGACCGGCTCGCGCCGCCCGTCCCGTCGGCCGAGGCCGAGGCGCTTGACCACATGACAGACTCCGACCTGCTCCGCGCGCTGCGCGGGCTGCCGAACGAGTTCCGTACCACGGTGTACCTCGCCGACATCGAGGGCTACCCGTACCGGGAGATCGCCGAGATCATGGGCACGCCGGTCGGCACCGTCATGTCCCGGCTGCACCGCGGGCGGCGCAAGATCCGCGAGGCGCTCGCCGACAGCGGCATCCTGCCGGCCGAAGGCTAA
PROTEIN sequence
Length: 182
DDSRIRFERDVVPQLSQLYPAALRMTRNPTDAEDLVQETSAKAYAAFHQFRPGTNLRAWLNRILTTTFINVYRKRRREPQQALGGDLQEWQMSADRLAPPVPSAEAEALDHMTDSDLLRALRGLPNEFRTTVYLADIEGYPYREIAEIMGTPVGTVMSRLHRGRRKIREALADSGILPAEG*