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A1-16-all-fractions_k255_709714_5

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: comp(2742..3359)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI00037BB02C similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 194.0
  • Bit_score: 230
  • Evalue 1.20e-57
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 207.0
  • Bit_score: 226
  • Evalue 3.70e-57
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACZ83143.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 207.0
  • Bit_score: 226
  • Evalue 1.80e-56

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Taxonomy

Streptosporangium roseum → Streptosporangium → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGACGGCGGAGAGCAAGGCACCACCCGGCGGGCACGGGGACCCGGATGCCGGGCCGCTCAGCGACGCGGCGGTCATCAGGATCTCACTGGACGACCCGGAGCGGTTCGAGGCCCTGTTCGGCAGGCACGCGCCCCGCATTCAGCGGTACGTGGTCCGCCGGCTCGGCCTGGACGCGGCCGACGACATCGTCGCGGAAACCTTTCTCCTGGCCTTCCGGCAGCGGGCAGCCTACGACCAGTCACGCGATGACGCACTGCCCTGGCTGTACGGGATCGCGACCCACCTCATCGGCCGTCACCACCGCGCGGAGACCCGGCTCTACCGGGCGCTGGCCAGGAGCGGCACCGATCCGGTGATCGCGCCGTTCACCGACCGGTCAGACGACCGGGTGACAGCGGGCGCGGCCAGCCTCCGCCTTGCCACCGCCCTGGCGGCGCTGCCTGCCGCCTACCGCGACACGCTCCTGCTCATCGCCTGGGGTGACCTCTCCTACGAGGAGACGGCAGACGCGCTTGGCATACCGACGGGCACGGTCCGCTCACGGGTCAACCGCGCCCGCGCCACCCTGCGCCGCAAGCTCGGCGACCTCAACCCGGCTAATTCCGAGGAGATCTGA
PROTEIN sequence
Length: 206
MTAESKAPPGGHGDPDAGPLSDAAVIRISLDDPERFEALFGRHAPRIQRYVVRRLGLDAADDIVAETFLLAFRQRAAYDQSRDDALPWLYGIATHLIGRHHRAETRLYRALARSGTDPVIAPFTDRSDDRVTAGAASLRLATALAALPAAYRDTLLLIAWGDLSYEETADALGIPTGTVRSRVNRARATLRRKLGDLNPANSEEI*