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A1-16-all-fractions_k255_4160005_4

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: comp(4088..4579)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor SigD n=1 Tax=Gordonia malaquae NBRC 108250 RepID=M3UHI4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 163.0
  • Bit_score: 235
  • Evalue 2.20e-59
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 163.0
  • Bit_score: 239
  • Evalue 4.40e-61
RNA polymerase sigma-54 factor RpoN {ECO:0000313|EMBL:AIY19332.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 163.0
  • Bit_score: 239
  • Evalue 2.20e-60

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Taxonomy

Pimelobacter simplex → Pimelobacter → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGAAGCAGCCGTTCGAGAAGGTCGTGGAGCAGCACGGCGGTGCGGTGCTGCGCGTGTGCCGGGTGATCCTCGGCGCCCACGACGCAGAGGACGCGTGGTCGGAGACGTTTCTCGCCGCGATGCGCGCGTACCCGGACCTGCCGGACGACGCCAACGCCGAGGCATGGCTGGTGACGATCGCGCGCCGCAAGGCCATCGACGTGCTCCGGTCACGCAAGCGGCAGCCGGCGCCGGCCGGCGACCTCCCCGACGCGCCGACGACGCTCGGCGTGCCGGGCGACCACGACGGCGACCTGTGGCAGGCGGTCGCCGCGCTGCCCGACAAGCAGCGTCAGGCGGTGGCGTACCACTACGTCGCCGGCCTGGCCTACGCGGAGATCGCCGCGCTGCTCGGCGGCAGCACCGACGCGGCACGCAGGGCCGCGGCCGACGGCATCAGGAACCTGCGGAAGAAATATCCAGGCGCGGCCATGGAAGGAGCGCCCTCATGA
PROTEIN sequence
Length: 164
MKQPFEKVVEQHGGAVLRVCRVILGAHDAEDAWSETFLAAMRAYPDLPDDANAEAWLVTIARRKAIDVLRSRKRQPAPAGDLPDAPTTLGVPGDHDGDLWQAVAALPDKQRQAVAYHYVAGLAYAEIAALLGGSTDAARRAAADGIRNLRKKYPGAAMEGAPS*