ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

A1-16-all-fractions_k255_1869150_1

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: comp(1..1218)

Top 3 Functional Annotations

Value Algorithm Source
Nuclease SbcCD, D subunit n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3ITX4_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 437.0
  • Bit_score: 345
  • Evalue 6.50e-92
nuclease SbcCD subunit D similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 437.0
  • Bit_score: 345
  • Evalue 1.80e-92
Nuclease SbcCD, D subunit {ECO:0000313|EMBL:ADP80021.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 437.0
  • Bit_score: 345
  • Evalue 9.20e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGTCACAGGCGTTCGCTACCGTCCTTGGCATGCGGTTCCTGCACACCTCGGACTGGCATCTGGGGCGATCGCTGCACCGGGCGGACCTGAGAGAGGCACAAGCGGCCTTCCTTGATCACCTGGCGGAGACGGCACGCTCTGAACGGGTGGACGCCGTGCTCGTGGCAGGGGACATCTACGATCGCGCGATTCCGCCGCTCGACGCGGTGGCGCTGTACGAGGACGCCCTTGCCAGGCTCCGCGCGACGGGCGCCAGGGTGGTGCTGATCAGCGGCAATCACGACTCGGCCCGCAGGCTCGGCGTCAACAGCGCGCTGATCGACGCCTCCGGCGTGCACCTGCGGACCCGGCCGGCCGCGGTGGCGGAGCCGGTGATCATGGACGACGCGCACGGCCAGGTCGCCGTGTACGGCATCCCCTACCTGGAACCGGCCCTTGGCTTGCCAGGCCCCGCACCCGGCGGCCCCGCGCCTGACGGCCCCGCCCCGTCTGGTCCCGGCTCCGCCGCCCCTTCTCTCGCCGACGGCCCCGACCCGGTCGGCCCCGCACCGGTCGGCCCCGCTCCCGTCTGCACCGCCGCCGCCGGCCGCCTGTCGCCAAGCGCGGATACCGCGGCGGGTACGCGAAGCCACGCCACCGTTCTGCGTCAGGCCGCTGGCCTGATCCGGGCGGATGCCGCCGCCCGCGGCGCGGACCGTACCGTCGTCCTTGCGCATGCCTGGGTGGCGAACGGCAGGGACGACGCGGAGCGGACGGAGTCCGCGCGGCGGCAGGCGAGCGACTCCGAGCGGGACATCGCGGTGGGCGGCATCGGCTACGTGCCGTCGGCGCTGTTCGACGGGTTCAGCTACGCCGCGCTCGGTCACCTGCACGGCAGGCAGACCCTCGCGGACCACCTGCGGTACTCCGGCTCGCCGCTGCCGTACTCGTTCTCCGAGCGGGATCACAGCAAGGGGAGCTGGCTTGTCGAGGTCGGCGCCGCCGGTCAAGCAGGCGGTACGGCCAGTGCCGAGTGGGTGCCCGCCCCGGTGCACCGGCGGCTCGCCGTGCTCGCCGGGCGCCTCGGCGACCTGCTGACGTCGCGCGAGCACGACGGGCGCGAAGGGGACTTTCTCGCCGTGACGCTCACCGACCAGGTACGCCCGGAGGGGGCGATGGACAAGCTGCGCGCCAGGTTCCCGCACATCCTGACGCTGGAGTTCCGTCCCGAGGGGGCG
PROTEIN sequence
Length: 406
MSQAFATVLGMRFLHTSDWHLGRSLHRADLREAQAAFLDHLAETARSERVDAVLVAGDIYDRAIPPLDAVALYEDALARLRATGARVVLISGNHDSARRLGVNSALIDASGVHLRTRPAAVAEPVIMDDAHGQVAVYGIPYLEPALGLPGPAPGGPAPDGPAPSGPGSAAPSLADGPDPVGPAPVGPAPVCTAAAGRLSPSADTAAGTRSHATVLRQAAGLIRADAAARGADRTVVLAHAWVANGRDDAERTESARRQASDSERDIAVGGIGYVPSALFDGFSYAALGHLHGRQTLADHLRYSGSPLPYSFSERDHSKGSWLVEVGAAGQAGGTASAEWVPAPVHRRLAVLAGRLGDLLTSREHDGREGDFLAVTLTDQVRPEGAMDKLRARFPHILTLEFRPEGA