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A1-16-all-fractions_k255_2280582_4

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: 4144..4503

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Nocardiopsis synnemataformans RepID=UPI0003632F66 similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 114.0
  • Bit_score: 120
  • Evalue 7.70e-25
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 114.0
  • Bit_score: 119
  • Evalue 4.80e-25
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 114.0
  • Bit_score: 119
  • Evalue 2.40e-24

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Taxonomy

Nocardiopsis dassonvillei → Nocardiopsis → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 360
GTGTCGCGAGCGAGCCCGGCCAGCCTCGCGAGCCAGCCTGGCGCTCCGCCGGAGGCGGCCGGCGAGCGGGAGCCAGGCGCCAGCCAGGACGAGCCGCTGGTGTCCGCCGCTGACGGCGATGACGACGAGGACCTTCCCGCGGCCCGGGGAGCGGCCGCCGCCAGCGCTTCGGCCGACCCGGTCAAGGACTACCTGAAGCAGATCGGCAAAGTGCCTCTGCTCAACGCCAGGCAAGAGGTCGAGCTGGCCAAGCGGATCGAGGCCGGGCTGTTCGCCGAGGAGAAGCTCGCCGAAGACAGCGGGGTGCTGCGGGCCGACCAGAGCATGGAGCTCGAGCTGGTCGTCGAAGACGGCAGGTGA
PROTEIN sequence
Length: 120
VSRASPASLASQPGAPPEAAGEREPGASQDEPLVSAADGDDDEDLPAARGAAAASASADPVKDYLKQIGKVPLLNARQEVELAKRIEAGLFAEEKLAEDSGVLRADQSMELELVVEDGR*