ggKbase home page

A1-16-all-fractions_metab_12

wsip-metawrap-drep-bins_Actinobacteria_71_1
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 901-950 of 1126 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
A1-16-all-fractions_k255_4000159
Species: Skermanella aerolata (50%)
2 2044 bp 67.07 0.29 55.19
A1-16-all-fractions_k255_593478
Species: Thermomonospora curvata (50%)
2 2044 bp 73.63 0.44 99.80
A1-16-all-fractions_k255_2036346
Class: Actinobacteria (100%)
3 2040 bp 70.54 0.15 36.91
A1-16-all-fractions_k255_1817790
Species: Amycolicicoccus subflavus (50%)
2 2038 bp 69.87 0.00 57.70
A1-16-all-fractions_k255_1435071
Class: Actinobacteria (100%)
3 2032 bp 66.73 1.40 90.06
A1-16-all-fractions_k255_1519839
Class: Actinobacteria (66.67%)
3 2028 bp 70.96 0.59 85.95
A1-16-all-fractions_k255_4907329
Species: Streptomyces griseus (100%)
1 2022 bp 69.58 0.30 91.25
A1-16-all-fractions_k255_4331609
Species: Streptomyces scabiei (50%)
2 2020 bp 73.02 0.45 89.41
A1-16-all-fractions_k255_3804553
Species: Thermomonospora curvata (50%)
2 2018 bp 75.17 1.11 81.32
A1-16-all-fractions_k255_3715144
Class: Actinobacteria (66.67%)
3 2016 bp 69.54 0.37 96.58
A1-16-all-fractions_k255_5006994
Species: Conexibacter woesei (50%)
4 2014 bp 68.42 1.42 101.59
A1-16-all-fractions_k255_3892096
Species: Amycolatopsis mediterranei (50%)
2 2008 bp 66.73 0.90 85.01
A1-16-all-fractions_k255_3772667
Species: RBG_16_RIF_CHLX_72_14_curated (50%)
2 2006 bp 67.90 2.99 81.36
A1-16-all-fractions_k255_1918438
Species: Thermomonospora curvata (66.67%)
3 2004 bp 70.56 1.42 71.11
A1-16-all-fractions_k255_76717
Genus: Streptomyces (50%)
4 2002 bp 69.83 0.00 85.71
A1-16-all-fractions_k255_3368922 3 2000 bp 71.35 0.45 78.60
A1-16-all-fractions_k255_536268
Class: Actinobacteria (100%)
3 2000 bp 70.30 2.93 96.15
A1-16-all-fractions_k255_2002266
Genus: Micromonospora (66.67%)
3 1994 bp 67.75 0.45 96.89
A1-16-all-fractions_k255_3511612
Domain: Bacteria (66.67%)
3 1992 bp 70.38 0.45 92.17
A1-16-all-fractions_k255_3461460
Class: Actinobacteria (66.67%)
3 1988 bp 71.68 1.13 84.66
A1-16-all-fractions_k255_3508444 3 1988 bp 66.25 1.13 71.08
A1-16-all-fractions_k255_3647618
Species: Thermomonospora curvata (50%)
2 1987 bp 70.91 0.30 96.18
A1-16-all-fractions_k255_4876072
Species: Microbispora sp. ATCC PTA-5024 (66.67%)
3 1982 bp 71.14 0.30 68.42
A1-16-all-fractions_k255_3054403
Species: Pyrenophora teres (50%)
2 1982 bp 65.94 0.76 93.54
A1-16-all-fractions_k255_748807
Species: Gloeobacter kilaueensis (50%)
2 1978 bp 70.42 0.30 74.92
A1-16-all-fractions_k255_823934
Species: Microbispora sp. ATCC PTA-5024 (66.67%)
3 1977 bp 73.34 0.23 90.14
A1-16-all-fractions_k255_811161
Species: Patulibacter medicamentivorans (50%)
4 1974 bp 69.45 1.22 95.14
A1-16-all-fractions_k255_1804502
Species: Lechevalieria aerocolonigenes (100%)
2 1970 bp 71.27 1.07 97.31
A1-16-all-fractions_k255_293529
Species: Streptosporangium roseum (50%)
2 1969 bp 67.14 0.15 55.46
A1-16-all-fractions_k255_5009049
Class: Actinobacteria (66.67%)
3 1965 bp 73.38 1.07 92.98
A1-16-all-fractions_k255_3529968
Species: Actinokineospora spheciospongiae (100%)
1 1958 bp 73.70 0.77 97.91
A1-16-all-fractions_k255_4857010
Phylum: Actinobacteria (50%)
4 1958 bp 70.43 0.46 96.83
A1-16-all-fractions_k255_1125634
Species: RBG_16_Actinobacteria_68_12_curated (66.67%)
3 1956 bp 69.84 1.15 65.80
A1-16-all-fractions_k255_3587176
Species: Streptomyces fradiae (50%)
2 1956 bp 74.18 4.37 97.09
A1-16-all-fractions_k255_1519234
Species: Eimeria necatrix (50%)
2 1954 bp 70.16 0.31 93.19
A1-16-all-fractions_k255_3902443
Order: Propionibacteriales (60%)
5 1953 bp 68.82 0.69 98.92
A1-16-all-fractions_k255_1646620
Species: Kutzneria albida (50%)
2 1949 bp 71.27 0.31 83.27
A1-16-all-fractions_k255_459692
Species: Pirellula staleyi (66.67%)
3 1944 bp 73.30 0.23 93.52
A1-16-all-fractions_k255_1559124
Class: Actinobacteria (100%)
3 1939 bp 68.59 1.93 59.72
A1-16-all-fractions_k255_3454794
Class: Actinobacteria (66.67%)
3 1936 bp 70.40 2.32 94.52
A1-16-all-fractions_k255_3813383
Phylum: Actinobacteria (50%)
4 1936 bp 70.92 0.70 94.06
A1-16-all-fractions_k255_790185
Species: Mycobacterium triplex (50%)
2 1934 bp 71.61 0.31 95.55
A1-16-all-fractions_k255_2012446
Genus: Streptomyces (100%)
3 1934 bp 74.46 0.54 95.71
A1-16-all-fractions_k255_3564117
Species: Bradyrhizobium sp. DOA9 (50%)
2 1927 bp 70.26 0.70 91.23
A1-16-all-fractions_k255_4685108
Species: Mycobacterium cosmeticum (50%)
2 1926 bp 67.55 1.71 89.41
A1-16-all-fractions_k255_743550
Order: Pseudonocardiales (50%)
4 1921 bp 70.59 0.31 91.67
A1-16-all-fractions_k255_874068
Species: Streptomyces sp. NRRL S-104 (50%)
2 1919 bp 67.85 0.16 74.26
A1-16-all-fractions_k255_173591
Order: Micrococcales (100%)
3 1915 bp 71.33 1.80 99.63
A1-16-all-fractions_k255_3204845 2 1914 bp 66.61 0.63 82.29
A1-16-all-fractions_k255_1739871
Domain: Bacteria (100%)
4 1911 bp 69.65 1.02 93.88
Displaying items 901-950 of 1126 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.