ggKbase home page

A1-16-all-fractions_k255_492766_1

Organism: A1-16-all-fractions_conc_68

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(7..657)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Frankia sp. CN3 RepID=G6H929_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 215.0
  • Bit_score: 159
  • Evalue 3.50e-36
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFC85005.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 222.0
  • Bit_score: 151
  • Evalue 7.90e-34
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 215.0
  • Bit_score: 148
  • Evalue 1.40e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGGAATCAGCGACGCGCACACGGAAGCCTTACGCCAAGACTGTGGAACGTCGTCTTGCCGTTGCGCGTGCCGCGCTGGAGATCATTCGCGAGAAGGGCCACCGCGCCCTGACGACCGCGGAGGTGGCCTCGCGTGCATCTATGAGTGAAACCGCCATGCTGTATCACTTCCCCTCGCGCGATCATATTCTGGTGGCCGCCATGGAGTTGGCCGACCGGGACAGCCGGGCTTTGCTGACAGAGCAGTTCCAAGGTAGCCGTACACTTCGCGACGAGTGGCCCCCGTCCGAGCTTGCCCGCCTGAGCGGGGAGGATGAGTCAATAACCCGTCTCTTCCTTGCACTGAGTGCCGAGGCCGTGAATCCAGAACATCCAGCCCACACGTATTTGAAGGACCACCGCGAAAACGCAGTCCTCGAATTTGCGGAAGGGGTTAAGAGGCGACAAGCGATCGGATACGCCCTGCCTGGCTTGGACCCCGTCAGCGTTGCCCGCCAAATGGTCGCTCTCTGGAGCGGACTACGCATGCAATGGCTTGTCGATCCATCCTTCGACCTGGCCGCCGAAGTGTCTCACGGTTTTCGGGCACTGACAGGTCAAGCGGTCATGGAGGCCAAACAGAAAATTGGTGACCTCATATCGAATATCTGA
PROTEIN sequence
Length: 217
MESATRTRKPYAKTVERRLAVARAALEIIREKGHRALTTAEVASRASMSETAMLYHFPSRDHILVAAMELADRDSRALLTEQFQGSRTLRDEWPPSELARLSGEDESITRLFLALSAEAVNPEHPAHTYLKDHRENAVLEFAEGVKRRQAIGYALPGLDPVSVARQMVALWSGLRMQWLVDPSFDLAAEVSHGFRALTGQAVMEAKQKIGDLISNI*