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A1-16-all-fractions_k255_3510869_7

Organism: A1-16-all-fractions_metab_conc_99

near complete RP 44 / 55 BSCG 43 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(3893..4843)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigB n=1 Tax=Salinispora pacifica RepID=UPI0002D6B4FF similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 316.0
  • Bit_score: 542
  • Evalue 1.70e-151
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 314.0
  • Bit_score: 542
  • Evalue 8.00e-152
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 314.0
  • Bit_score: 542
  • Evalue 4.00e-151

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Taxonomy

Salinispora arenicola → Salinispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 951
GTGGTGAACCAGGAGAAGGTAAGGGTACTGCGTACCGACGAGGTCGCCGAGGAGCGCGACCTGGTCGGCGTGTACCTGCACGAGATTTCCAGAACCCCGCTGCTCGACGCCGCCCAGGAAGTGGAGCTGTCCCGGGCCATCGAGGCCGGTCTGTACGCCGAGCACCTGCTCGACGAGGGCACCATCCCACCCGGGGTCAAGCGGAGCGAGCTCAAGCTGCTGGTCAGCGAGGGGGAGCGGGCCAAGGACCAGTTCATCCGGGCCAACCTGCGGCTGGTCGTCTCGATCGCCCGGCGCTACGTGCGCTCCGGGATGCCGATGCTCGACCTGATCCAGGAGGGCAACACCGGTCTGGTACGCGCGGTGGAGAAGTTCGACTACGAGCGCGGGTACAAGTTCTCGACGTACGCGACGTGGTGGATCCGCCAGGCGATCAGCCGGGCGATCGCCCAGCAGGAGCGCACGGTACGGCTACCGGTGCACCTGGTCGAGGACGTGAACCGGATGCGCAGCGCGCAGCGCCAGCTCACCCGGGAACTGGGCAGCGACCCGGAGCCGGAGCAGGTGGCCGTCGCGCTGGGCGTACCGCTGGAGCGGGTGATCGAGCTGATGCGCTGGTCGCAGGACACCGTGTCCCTGGACACGCCGGTCGGTGACGACGGCGACACCAACCTGGGTGACCTGGTCGCCGACAGCGACTCGCCCTCGCCGGAGGACATCGTCCTCGGGGCGCTGGAACGCCAGCGGATCGAGGGTCTGCTCGGGCACCTCGACGACCGGTCGGCCGGGATCATGCGGGCCCGGTACGGCCTGGAGGACGGGCGGGAGCACTCGCTGACCGAGGTGGCGTCCCAGTTCTCGCTGTCGCGGGAGCGGATCCGGCAACTGGAGATCCAGGCGCTGGGCCGGCTGCGCGAGCTGGCGCGGGCCGAGGGGCTCCAGGCGGCCTGA
PROTEIN sequence
Length: 317
VVNQEKVRVLRTDEVAEERDLVGVYLHEISRTPLLDAAQEVELSRAIEAGLYAEHLLDEGTIPPGVKRSELKLLVSEGERAKDQFIRANLRLVVSIARRYVRSGMPMLDLIQEGNTGLVRAVEKFDYERGYKFSTYATWWIRQAISRAIAQQERTVRLPVHLVEDVNRMRSAQRQLTRELGSDPEPEQVAVALGVPLERVIELMRWSQDTVSLDTPVGDDGDTNLGDLVADSDSPSPEDIVLGALERQRIEGLLGHLDDRSAGIMRARYGLEDGREHSLTEVASQFSLSRERIRQLEIQALGRLRELARAEGLQAA*